Analysis of interatomic Contacts of Structural Units in PDB entry:
11YA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 11YA entry

There is 1 chain in PDB entry 11YA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 10ARG 553
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 11YA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 27Right-handed alpha
Helix 2
AA2
A
28 37Right-handed alpha
Helix 3
AA3
A
39 41Right-handed 310
Helix 4
AA4
A
42 60Right-handed alpha
Helix 5
AA5
A
62 77Right-handed alpha
Helix 6
AA6
A
79 118Right-handed alpha
Helix 7
AA7
A
128 143Right-handed alpha
Helix 8
AA8
A
145 159Right-handed alpha
Helix 9
AA9
A
162 190Right-handed alpha
Helix 10
AB1
A
194 234Right-handed alpha
Helix 11
AB2
A
242 283Right-handed alpha
Helix 12
AB3
A
285 298Right-handed alpha
Helix 13
AB4
A
298 312Right-handed alpha
Helix 14
AB5
A
313 318Right-handed alpha
Helix 15
AB6
A
318 328Right-handed alpha
Helix 16
AB7
A
330 359Right-handed alpha
Helix 17
AB8
A
359 369Right-handed alpha
Helix 18
AB9
A
378 391Right-handed alpha
Helix 19
AC1
A
392 410Right-handed alpha
Helix 20
AC2
A
412 467Right-handed alpha
Helix 21
AC3
A
470 501Right-handed alpha
Helix 22
AC4
A
505 531Right-handed alpha
Helix 23
AC5
A
534 539Right-handed alpha
Helix 24
AC6
A
540 549Right-handed alpha
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There are no sheets in PDB entry 11YA
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