Analysis of interatomic Contacts of Structural Units in PDB entry:
11YE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 11YE entry

There are 3 chains in PDB entry 11YE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 LEU 784GLU 2547
D
 LEU 784GLU 2547
E
 LEU 784GLU 2547
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are180 helices in PDB entry 11YE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
784 825Right-handed alpha
Helix 2
AA2
C
825 840Right-handed alpha
Helix 3
AA3
C
846 865Right-handed alpha
Helix 4
AA4
C
899 904Right-handed alpha
Helix 5
AA5
C
922 951Right-handed alpha
Helix 6
AA6
C
975 984Right-handed alpha
Helix 7
AA7
C
989 998Right-handed alpha
Helix 8
AA8
C
999 1004Right-handed 310
Helix 9
AA9
C
1005 1017Right-handed alpha
Helix 10
AB1
C
1019 1024Right-handed alpha
Helix 11
AB2
C
1025 1052Right-handed alpha
Helix 12
AB3
C
1073 1081Right-handed alpha
Helix 13
AB4
C
1091 1113Right-handed alpha
Helix 14
AB5
C
1141 1145Right-handed 310
Helix 15
AB6
C
1148 1177Right-handed alpha
Helix 16
AB7
C
1178 1202Right-handed alpha
Helix 17
AB8
C
1204 1231Right-handed alpha
Helix 18
AB9
C
1232 1234Right-handed 310
Helix 19
AC1
C
1242 1249Right-handed alpha
Helix 20
AC2
C
1262 1268Right-handed alpha
Helix 21
AC3
C
1279 1292Right-handed alpha
Helix 22
AC4
C
1295 1300Right-handed alpha
Helix 23
AC5
C
1302 1365Right-handed alpha
Helix 24
AC6
C
1403 1408Right-handed alpha
Helix 25
AC7
C
1412 1416Right-handed 310
Helix 26
AC8
C
1417 1421Right-handed 310
Helix 27
AC9
C
1496 1524Right-handed alpha
Helix 28
AD1
C
1524 1548Right-handed alpha
Helix 29
AD2
C
1552 1559Right-handed alpha
Helix 30
AD3
C
1656 1670Right-handed alpha
Helix 31
AD4
C
1671 1686Right-handed alpha
Helix 32
AD5
C
1686 1700Right-handed alpha
Helix 33
AD6
C
1705 1717Right-handed alpha
Helix 34
AD7
C
1725 1748Right-handed alpha
Helix 35
AD8
C
1752 1756Right-handed 310
Helix 36
AD9
C
1757 1762Right-handed alpha
Helix 37
AE1
C
1769 1775Right-handed alpha
Helix 38
AE2
C
1785 1804Right-handed alpha
Helix 39
AE3
C
1947 1968Right-handed alpha
Helix 40
AE4
C
1976 1997Right-handed alpha
Helix 41
AE5
C
2016 2040Right-handed alpha
Helix 42
AE6
C
2042 2063Right-handed alpha
Helix 43
AE7
C
2064 2069Right-handed alpha
Helix 44
AE8
C
2076 2099Right-handed alpha
Helix 45
AE9
C
2116 2128Right-handed alpha
Helix 46
AF1
C
2130 2144Right-handed alpha
Helix 47
AF2
C
2150 2175Right-handed alpha
Helix 48
AF3
C
2184 2215Right-handed alpha
Helix 49
AF4
C
2244 2246Right-handed 310
Helix 50
AF5
C
2251 2263Right-handed alpha
Helix 51
AF6
C
2266 2275Right-handed alpha
Helix 52
AF7
C
2297 2311Right-handed alpha
Helix 53
AF8
C
2326 2330Right-handed 310
Helix 54
AF9
C
2348 2359Right-handed alpha
Helix 55
AG1
C
2465 2486Right-handed alpha
Helix 56
AG2
C
2488 2490Right-handed 310
Helix 57
AG3
C
2491 2496Right-handed alpha
Helix 58
AG4
C
2500 2516Right-handed alpha
Helix 59
AG5
C
2518 2533Right-handed alpha
Helix 60
AG6
C
2535 2543Right-handed alpha
Helix 61
AG7
D
785 825Right-handed alpha
Helix 62
AG8
D
825 840Right-handed alpha
Helix 63
AG9
D
846 865Right-handed alpha
Helix 64
AH1
D
899 904Right-handed alpha
Helix 65
AH2
D
922 951Right-handed alpha
Helix 66
AH3
D
975 984Right-handed alpha
Helix 67
AH4
D
989 998Right-handed alpha
Helix 68
AH5
D
999 1004Right-handed 310
Helix 69
AH6
D
1005 1017Right-handed alpha
Helix 70
AH7
D
1019 1024Right-handed alpha
Helix 71
AH8
D
1025 1052Right-handed alpha
Helix 72
AH9
D
1073 1081Right-handed alpha
Helix 73
AI1
D
1091 1113Right-handed alpha
Helix 74
AI2
D
1141 1145Right-handed 310
Helix 75
AI3
D
1148 1177Right-handed alpha
Helix 76
AI4
D
1178 1202Right-handed alpha
Helix 77
AI5
D
1204 1231Right-handed alpha
Helix 78
AI6
D
1232 1234Right-handed 310
Helix 79
AI7
D
1242 1249Right-handed alpha
Helix 80
AI8
D
1262 1268Right-handed alpha
Helix 81
AI9
D
1279 1292Right-handed alpha
Helix 82
AJ1
D
1295 1300Right-handed alpha
Helix 83
AJ2
D
1302 1365Right-handed alpha
Helix 84
AJ3
D
1403 1408Right-handed alpha
Helix 85
AJ4
D
1412 1416Right-handed 310
Helix 86
AJ5
D
1417 1421Right-handed 310
Helix 87
AJ6
D
1496 1524Right-handed alpha
Helix 88
AJ7
D
1524 1548Right-handed alpha
Helix 89
AJ8
D
1552 1559Right-handed alpha
Helix 90
AJ9
D
1656 1670Right-handed alpha
Helix 91
AK1
D
1671 1686Right-handed alpha
Helix 92
AK2
D
1686 1700Right-handed alpha
Helix 93
AK3
D
1705 1717Right-handed alpha
Helix 94
AK4
D
1725 1748Right-handed alpha
Helix 95
AK5
D
1752 1756Right-handed 310
Helix 96
AK6
D
1757 1762Right-handed alpha
Helix 97
AK7
D
1769 1775Right-handed alpha
Helix 98
AK8
D
1785 1804Right-handed alpha
Helix 99
AK9
D
1947 1968Right-handed alpha
Helix 100
AL1
D
1976 1997Right-handed alpha
Helix 101
AL2
D
2016 2040Right-handed alpha
Helix 102
AL3
D
2042 2063Right-handed alpha
Helix 103
AL4
D
2064 2069Right-handed alpha
Helix 104
AL5
D
2076 2099Right-handed alpha
Helix 105
AL6
D
2116 2128Right-handed alpha
Helix 106
AL7
D
2130 2144Right-handed alpha
Helix 107
AL8
D
2150 2175Right-handed alpha
Helix 108
AL9
D
2184 2215Right-handed alpha
Helix 109
AM1
D
2244 2246Right-handed 310
Helix 110
AM2
D
2251 2263Right-handed alpha
Helix 111
AM3
D
2266 2275Right-handed alpha
Helix 112
AM4
D
2297 2311Right-handed alpha
Helix 113
AM5
D
2326 2330Right-handed 310
Helix 114
AM6
D
2348 2359Right-handed alpha
Helix 115
AM7
D
2465 2486Right-handed alpha
Helix 116
AM8
D
2488 2490Right-handed 310
Helix 117
AM9
D
2491 2496Right-handed alpha
Helix 118
AN1
D
2500 2516Right-handed alpha
Helix 119
AN2
D
2518 2533Right-handed alpha
Helix 120
AN3
D
2535 2543Right-handed alpha
Helix 121
AN4
E
785 825Right-handed alpha
Helix 122
AN5
E
825 840Right-handed alpha
Helix 123
AN6
E
846 865Right-handed alpha
Helix 124
AN7
E
899 904Right-handed alpha
Helix 125
AN8
E
922 951Right-handed alpha
Helix 126
AN9
E
975 984Right-handed alpha
Helix 127
AO1
E
989 998Right-handed alpha
Helix 128
AO2
E
999 1004Right-handed 310
Helix 129
AO3
E
1005 1017Right-handed alpha
Helix 130
AO4
E
1019 1024Right-handed alpha
Helix 131
AO5
E
1025 1052Right-handed alpha
Helix 132
AO6
E
1073 1081Right-handed alpha
Helix 133
AO7
E
1091 1113Right-handed alpha
Helix 134
AO8
E
1141 1145Right-handed 310
Helix 135
AO9
E
1148 1177Right-handed alpha
Helix 136
AP1
E
1178 1202Right-handed alpha
Helix 137
AP2
E
1204 1231Right-handed alpha
Helix 138
AP3
E
1232 1234Right-handed 310
Helix 139
AP4
E
1242 1249Right-handed alpha
Helix 140
AP5
E
1262 1268Right-handed alpha
Helix 141
AP6
E
1279 1292Right-handed alpha
Helix 142
AP7
E
1295 1300Right-handed alpha
Helix 143
AP8
E
1302 1365Right-handed alpha
Helix 144
AP9
E
1403 1408Right-handed alpha
Helix 145
AQ1
E
1412 1416Right-handed 310
Helix 146
AQ2
E
1417 1421Right-handed 310
Helix 147
AQ3
E
1496 1524Right-handed alpha
Helix 148
AQ4
E
1524 1548Right-handed alpha
Helix 149
AQ5
E
1552 1559Right-handed alpha
Helix 150
AQ6
E
1656 1670Right-handed alpha
Helix 151
AQ7
E
1671 1686Right-handed alpha
Helix 152
AQ8
E
1686 1700Right-handed alpha
Helix 153
AQ9
E
1705 1717Right-handed alpha
Helix 154
AR1
E
1725 1748Right-handed alpha
Helix 155
AR2
E
1752 1756Right-handed 310
Helix 156
AR3
E
1757 1762Right-handed alpha
Helix 157
AR4
E
1769 1775Right-handed alpha
Helix 158
AR5
E
1785 1804Right-handed alpha
Helix 159
AR6
E
1947 1968Right-handed alpha
Helix 160
AR7
E
1976 1997Right-handed alpha
Helix 161
AR8
E
2016 2040Right-handed alpha
Helix 162
AR9
E
2042 2063Right-handed alpha
Helix 163
AS1
E
2064 2069Right-handed alpha
Helix 164
AS2
E
2076 2099Right-handed alpha
Helix 165
AS3
E
2116 2128Right-handed alpha
Helix 166
AS4
E
2130 2144Right-handed alpha
Helix 167
AS5
E
2150 2175Right-handed alpha
Helix 168
AS6
E
2184 2215Right-handed alpha
Helix 169
AS7
E
2244 2246Right-handed 310
Helix 170
AS8
E
2251 2263Right-handed alpha
Helix 171
AS9
E
2266 2275Right-handed alpha
Helix 172
AT1
E
2297 2311Right-handed alpha
Helix 173
AT2
E
2326 2330Right-handed 310
Helix 174
AT3
E
2348 2359Right-handed alpha
Helix 175
AT4
E
2465 2486Right-handed alpha
Helix 176
AT5
E
2488 2490Right-handed 310
Helix 177
AT6
E
2491 2496Right-handed alpha
Helix 178
AT7
E
2500 2516Right-handed alpha
Helix 179
AT8
E
2518 2533Right-handed alpha
Helix 180
AT9
E
2535 2543Right-handed alpha
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There are 9 sheets in PDB entry 11YE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2240 2243first strand
Strand 2
C
2226 2232anti-parallel
Strand 3
C
2315 2324anti-parallel
Strand 4
C
2335 2344anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2248 2250first strand
Strand 2
C
2281 2287anti-parallel
Strand 3
C
2443 2450anti-parallel
Strand 4
C
2375 2378parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2366 2372first strand
Strand 2
C
2399 2409anti-parallel
Strand 3
C
2426 2434anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2240 2243first strand
Strand 2
D
2226 2232anti-parallel
Strand 3
D
2315 2324anti-parallel
Strand 4
D
2335 2344anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2248 2250first strand
Strand 2
D
2281 2287anti-parallel
Strand 3
D
2443 2450anti-parallel
Strand 4
D
2375 2378parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2366 2372first strand
Strand 2
D
2399 2409anti-parallel
Strand 3
D
2426 2434anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
2240 2243first strand
Strand 2
E
2226 2232anti-parallel
Strand 3
E
2315 2324anti-parallel
Strand 4
E
2335 2344anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
2248 2250first strand
Strand 2
E
2281 2287anti-parallel
Strand 3
E
2443 2450anti-parallel
Strand 4
E
2375 2378parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
2366 2372first strand
Strand 2
E
2399 2409anti-parallel
Strand 3
E
2426 2434anti-parallel
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