Analysis of interatomic Contacts of Structural Units in PDB entry:
12AW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 12AW entry

There are 2 chains in PDB entry 12AW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1189LYS 1448
B
 THR 1186LYS 1448
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 12AW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1201 1211Right-handed alpha
Helix 2
AA2
A
1221 1233Right-handed alpha
Helix 3
AA3
A
1247 1258Right-handed alpha
Helix 4
AA4
A
1297 1322Right-handed alpha
Helix 5
AA5
A
1341 1358Right-handed alpha
Helix 6
AA6
A
1365 1373Right-handed alpha
Helix 7
AA7
A
1376 1389Right-handed alpha
Helix 8
AA8
A
1391 1411Right-handed alpha
Helix 9
AA9
A
1414 1422Right-handed alpha
Helix 10
AB1
A
1426 1438Right-handed alpha
Helix 11
AB2
A
1441 1446Right-handed alpha
Helix 12
AB3
B
1199 1211Right-handed alpha
Helix 13
AB4
B
1221 1233Right-handed alpha
Helix 14
AB5
B
1247 1258Right-handed alpha
Helix 15
AB6
B
1282 1286Right-handed 310
Helix 16
AB7
B
1295 1321Right-handed alpha
Helix 17
AB8
B
1341 1358Right-handed alpha
Helix 18
AB9
B
1365 1373Right-handed alpha
Helix 19
AC1
B
1376 1389Right-handed alpha
Helix 20
AC2
B
1391 1411Right-handed alpha
Helix 21
AC3
B
1414 1422Right-handed alpha
Helix 22
AC4
B
1426 1438Right-handed alpha
Helix 23
AC5
B
1441 1448Right-handed alpha
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There are 2 sheets in PDB entry 12AW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1215 1217first strand
Strand 2
A
1192 1196parallel
Strand 3
A
1236 1240parallel
Strand 4
A
1266 1269parallel
Strand 5
A
1288 1290parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1215 1219first strand
Strand 2
B
1192 1196parallel
Strand 3
B
1236 1239parallel
Strand 4
B
1266 1268parallel
Strand 5
B
1288 1289parallel
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