Analysis of interatomic Contacts of Structural Units in PDB entry:
13IO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 13IO entry

There are 8 chains in PDB entry 13IO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 48PRO 100
B
 VAL 48PRO 100
C
 VAL 48PRO 100
D
 VAL 48PRO 100
E
 ALA 173PRO 343
F
 ALA 173PRO 343
G
 THR 175LEU 344
H
 THR 175LEU 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 13IO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
65 95Right-handed alpha
Helix 2
AA2
B
65 95Right-handed alpha
Helix 3
AA3
C
65 95Right-handed alpha
Helix 4
AA4
D
65 95Right-handed alpha
Helix 5
AA5
E
175 191Right-handed alpha
Helix 6
AA6
E
191 256Right-handed alpha
Helix 7
AA7
E
259 286Right-handed alpha
Helix 8
AA8
E
290 310Right-handed alpha
Helix 9
AA9
E
313 335Right-handed alpha
Helix 10
AB1
F
174 190Right-handed alpha
Helix 11
AB2
F
191 256Right-handed alpha
Helix 12
AB3
F
259 286Right-handed alpha
Helix 13
AB4
F
290 310Right-handed alpha
Helix 14
AB5
F
313 335Right-handed alpha
Helix 15
AB6
G
176 190Right-handed alpha
Helix 16
AB7
G
191 256Right-handed alpha
Helix 17
AB8
G
259 286Right-handed alpha
Helix 18
AB9
G
290 311Right-handed alpha
Helix 19
AC1
G
313 334Right-handed alpha
Helix 20
AC2
G
334 340Right-handed alpha
Helix 21
AC3
H
176 190Right-handed alpha
Helix 22
AC4
H
192 214Right-handed alpha
Helix 23
AC5
H
214 256Right-handed alpha
Helix 24
AC6
H
259 286Right-handed alpha
Helix 25
AC7
H
290 311Right-handed alpha
Helix 26
AC8
H
313 334Right-handed alpha
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There are no sheets in PDB entry 13IO
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il