Analysis of interatomic Contacts of Structural Units in PDB entry:
180L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 180L entry

There are 2 chains in PDB entry 180L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 162
B
 MET 1LEU 164
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 180L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
A1
A
3 11Right-handed alpha
Helix 2
A2
A
39 50Right-handed alpha
Helix 3
A3
A
60 80Right-handed alpha
Helix 4
A4
A
82 90Right-handed alpha
Helix 5
A5
A
93 106Right-handed alpha
Helix 6
A6
A
108 113Right-handed alpha
Helix 7
A7
A
115 123Right-handed alpha
Helix 8
A8
A
126 134Right-handed alpha
Helix 9
A9
A
137 141Right-handed alpha
Helix 10
A10
A
143 155Right-handed alpha
Helix 11
A1
B
3 11Right-handed alpha
Helix 12
A2
B
39 50Right-handed alpha
Helix 13
A3
B
60 80Right-handed alpha
Helix 14
A4
B
82 90Right-handed alpha
Helix 15
A5
B
93 106Right-handed alpha
Helix 16
A6
B
108 113Right-handed alpha
Helix 17
A7
B
115 123Right-handed alpha
Helix 18
A8
B
126 134Right-handed alpha
Helix 19
A9
B
137 141Right-handed alpha
Helix 20
A10
B
143 155Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 180L. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 27first strand
Strand 2
A
31 34anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 27first strand
Strand 2
B
31 34anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il