Analysis of interatomic Contacts of Structural Units in PDB entry:
1A0D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1A0D entry

There are 4 chains in PDB entry 1A0D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1CYS 437
B
 PRO 1CYS 437
C
 PRO 1CYS 437
D
 PRO 1CYS 437
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 1A0D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 40Right-handed alpha
Helix 2
2
A
46 51Right-handed alpha
Helix 3
3
A
66 69Right-handed 310
Helix 4
4
A
72 90Right-handed alpha
Helix 5
5
A
99 102Right-handed alpha
Helix 6
6
A
109 129Right-handed alpha
Helix 7
7
A
145 147Right-handed 310
Helix 8
8
A
157 177Right-handed alpha
Helix 9
9
A
194 196Right-handed 310
Helix 10
10
A
199 219Right-handed alpha
Helix 11
11
A
244 253Right-handed alpha
Helix 12
12
A
257 259Right-handed 310
Helix 13
13
A
266 271Right-handed alpha
Helix 14
14
A
276 286Right-handed alpha
Helix 15
15
A
312 324Right-handed alpha
Helix 16
16
A
346 372Right-handed 310
Helix 17
17
A
375 383Right-handed alpha
Helix 18
18
A
385 388Right-handed 310
Helix 19
19
A
390 397Right-handed alpha
Helix 20
20
A
402 411Right-handed alpha
Helix 21
21
A
422 434Right-handed alpha
Helix 22
22
B
36 40Right-handed alpha
Helix 23
23
B
46 51Right-handed alpha
Helix 24
24
B
66 69Right-handed 310
Helix 25
25
B
72 90Right-handed alpha
Helix 26
26
B
99 102Right-handed alpha
Helix 27
27
B
109 129Right-handed alpha
Helix 28
28
B
145 147Right-handed 310
Helix 29
29
B
157 177Right-handed alpha
Helix 30
30
B
194 196Right-handed 310
Helix 31
31
B
199 219Right-handed alpha
Helix 32
32
B
244 253Right-handed alpha
Helix 33
33
B
257 259Right-handed 310
Helix 34
34
B
266 271Right-handed alpha
Helix 35
35
B
276 286Right-handed alpha
Helix 36
36
B
312 324Right-handed alpha
Helix 37
37
B
346 372Right-handed 310
Helix 38
38
B
375 383Right-handed alpha
Helix 39
39
B
385 388Right-handed 310
Helix 40
40
B
390 397Right-handed alpha
Helix 41
41
B
402 411Right-handed alpha
Helix 42
42
B
422 434Right-handed alpha
Helix 43
43
C
36 40Right-handed alpha
Helix 44
44
C
46 51Right-handed alpha
Helix 45
45
C
66 69Right-handed 310
Helix 46
46
C
72 90Right-handed alpha
Helix 47
47
C
99 102Right-handed alpha
Helix 48
48
C
109 129Right-handed alpha
Helix 49
49
C
145 147Right-handed 310
Helix 50
50
C
157 177Right-handed alpha
Helix 51
51
C
194 196Right-handed 310
Helix 52
52
C
199 219Right-handed alpha
Helix 53
53
C
244 253Right-handed alpha
Helix 54
54
C
257 259Right-handed 310
Helix 55
55
C
266 271Right-handed alpha
Helix 56
56
C
276 286Right-handed alpha
Helix 57
57
C
312 324Right-handed alpha
Helix 58
58
C
346 372Right-handed 310
Helix 59
59
C
375 383Right-handed alpha
Helix 60
60
C
385 388Right-handed 310
Helix 61
61
C
390 397Right-handed alpha
Helix 62
62
C
402 411Right-handed alpha
Helix 63
63
C
422 434Right-handed alpha
Helix 64
64
D
36 40Right-handed alpha
Helix 65
65
D
46 51Right-handed alpha
Helix 66
66
D
66 69Right-handed 310
Helix 67
67
D
72 90Right-handed alpha
Helix 68
68
D
99 102Right-handed alpha
Helix 69
69
D
109 129Right-handed alpha
Helix 70
70
D
145 147Right-handed 310
Helix 71
71
D
157 177Right-handed alpha
Helix 72
72
D
194 196Right-handed 310
Helix 73
73
D
199 219Right-handed alpha
Helix 74
74
D
244 253Right-handed alpha
Helix 75
75
D
257 259Right-handed 310
Helix 76
76
D
266 271Right-handed alpha
Helix 77
77
D
276 286Right-handed alpha
Helix 78
78
D
312 324Right-handed alpha
Helix 79
79
D
346 372Right-handed 310
Helix 80
80
D
375 383Right-handed alpha
Helix 81
81
D
385 388Right-handed 310
Helix 82
82
D
390 397Right-handed alpha
Helix 83
83
D
402 411Right-handed alpha
Helix 84
84
D
422 434Right-handed alpha
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There are 4 sheets in PDB entry 1A0D. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 335first strand
Strand 2
A
42 45parallel
Strand 3
A
94 98parallel
Strand 4
A
133 138parallel
Strand 5
A
181 184parallel
Strand 6
A
225 228parallel
Strand 7
A
260 265parallel
Strand 8
A
289 293parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
333 335first strand
Strand 2
B
42 45parallel
Strand 3
B
94 98parallel
Strand 4
B
133 138parallel
Strand 5
B
181 184parallel
Strand 6
B
225 228parallel
Strand 7
B
260 265parallel
Strand 8
B
289 293parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
333 335first strand
Strand 2
C
42 45parallel
Strand 3
C
94 98parallel
Strand 4
C
133 138parallel
Strand 5
C
181 184parallel
Strand 6
C
225 228parallel
Strand 7
C
260 265parallel
Strand 8
C
289 293parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
333 335first strand
Strand 2
D
42 45parallel
Strand 3
D
94 98parallel
Strand 4
D
133 138parallel
Strand 5
D
181 184parallel
Strand 6
D
225 228parallel
Strand 7
D
260 265parallel
Strand 8
D
289 293parallel
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