Analysis of interatomic Contacts of Structural Units in PDB entry:
1A59


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1A59 entry

There is 1 chain in PDB entry 1A59 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 2PRO 378
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1A59. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
7 9Right-handed 310
Helix 2
2
A
36 42Right-handed alpha
Helix 3
3
A
45 54Right-handed alpha
Helix 4
4
A
60 72Right-handed alpha
Helix 5
5
A
78 86Right-handed alpha
Helix 6
6
A
93 106Right-handed alpha
Helix 7
7
A
116 141Right-handed alpha
Helix 8
8
A
155 164Right-handed alpha
Helix 9
9
A
170 183Right-handed alpha
Helix 10
10
A
190 201Right-handed alpha
Helix 11
11
A
205 217Right-handed alpha
Helix 12
12
A
222 234Right-handed 310
Helix 13
13
A
243 259Right-handed alpha
Helix 14
14
A
279 292Right-handed alpha
Helix 15
15
A
296 313Right-handed 310
Helix 16
16
A
319 329Right-handed alpha
Helix 17
17
A
334 359Right-handed 310
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There is 1 sheet ( A) in PDB entry 1A59.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
20 23first strand
Strand 2
A
28 31anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il