Analysis of interatomic Contacts of Structural Units in PDB entry:
1AD1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1AD1 entry

There are 2 chains in PDB entry 1AD1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2ASN 265
B
 THR 2SER 267
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 1AD1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 16Right-handed 310
Helix 2
2
A
26 38Right-handed alpha
Helix 3
3
A
60 74Right-handed alpha
Helix 4
4
A
88 96Right-handed alpha
Helix 5
5
A
112 120Right-handed 310
Helix 6
6
A
139 156Right-handed alpha
Helix 7
7
A
161 163Right-handed 310
Helix 8
8
A
176 184Right-handed alpha
Helix 9
9
A
186 192Right-handed alpha
Helix 10
10
A
204 209Right-handed alpha
Helix 11
11
A
216 233Right-handed 310
Helix 12
12
A
243 264Right-handed alpha
Helix 13
13
B
26 38Right-handed alpha
Helix 14
14
B
60 74Right-handed alpha
Helix 15
15
B
88 97Right-handed alpha
Helix 16
16
B
112 121Right-handed 310
Helix 17
17
B
139 157Right-handed alpha
Helix 18
18
B
161 163Right-handed 310
Helix 19
19
B
176 183Right-handed alpha
Helix 20
20
B
186 192Right-handed alpha
Helix 21
21
B
204 210Right-handed alpha
Helix 22
22
B
216 232Right-handed 310
Helix 23
23
B
243 264Right-handed alpha
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There are 2 sheets in PDB entry 1AD1. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 240first strand
Strand 2
A
5 11parallel
Strand 3
A
43 47parallel
Strand 4
A
80 84parallel
Strand 5
A
101 104parallel
Strand 6
A
124 128parallel
Strand 7
A
164 167parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
237 240first strand
Strand 2
B
5 11parallel
Strand 3
B
43 47parallel
Strand 4
B
80 84parallel
Strand 5
B
101 104parallel
Strand 6
B
124 128parallel
Strand 7
B
164 167parallel
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