Analysis of interatomic Contacts of Structural Units in PDB entry:
1AD3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1AD3 entry

There are 2 chains in PDB entry 1AD3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ALA 447
B
 SER 2ALA 447
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 1AD3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 15Right-handed alpha
Helix 2
2
A
18 20Right-handed 310
Helix 3
3
A
22 51Right-handed alpha
Helix 4
4
A
55 61Right-handed alpha
Helix 5
5
A
63 81Right-handed alpha
Helix 6
6
A
90 92Right-handed 310
Helix 7
7
A
118 129Right-handed alpha
Helix 8
8
A
143 156Right-handed alpha
Helix 9
9
A
169 177Right-handed alpha
Helix 10
10
A
189 202Right-handed alpha
Helix 11
11
A
224 236Right-handed alpha
Helix 12
12
A
253 271Right-handed 310
Helix 13
13
A
275 277Right-handed 310
Helix 14
14
A
287 297Right-handed alpha
Helix 15
15
A
328 330Right-handed 310
Helix 16
16
A
347 356Right-handed alpha
Helix 17
17
A
370 379Right-handed alpha
Helix 18
18
A
392 395Right-handed 310
Helix 19
19
A
405 407Right-handed 310
Helix 20
20
A
414 420Right-handed 310
Helix 21
21
A
439 441Right-handed 310
Helix 22
22
B
3 16Right-handed alpha
Helix 23
23
B
18 20Right-handed 310
Helix 24
24
B
22 38Right-handed alpha
Helix 25
25
B
40 51Right-handed alpha
Helix 26
26
B
55 61Right-handed alpha
Helix 27
27
B
63 81Right-handed alpha
Helix 28
28
B
90 92Right-handed 310
Helix 29
29
B
118 129Right-handed alpha
Helix 30
30
B
143 156Right-handed alpha
Helix 31
31
B
169 177Right-handed alpha
Helix 32
32
B
189 202Right-handed alpha
Helix 33
33
B
224 236Right-handed alpha
Helix 34
34
B
253 271Right-handed 310
Helix 35
35
B
275 277Right-handed 310
Helix 36
36
B
287 297Right-handed alpha
Helix 37
37
B
328 330Right-handed 310
Helix 38
38
B
347 355Right-handed alpha
Helix 39
39
B
370 379Right-handed alpha
Helix 40
40
B
392 395Right-handed 310
Helix 41
41
B
405 407Right-handed 310
Helix 42
42
B
415 420Right-handed alpha
Helix 43
43
B
439 441Right-handed 310
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There are 4 sheets in PDB entry 1AD3. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 103first strand
Strand 2
A
422 429anti-parallel
Strand 3
B
384 387parallel
Strand 4
B
362 366parallel
Strand 5
B
215 218parallel
Strand 6
B
248 251parallel
Strand 7
B
338 343parallel
Strand 8
B
318 320parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 209first strand
Strand 2
A
182 186parallel
Strand 3
A
106 110parallel
Strand 4
A
133 137parallel
Strand 5
A
162 165parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 103first strand
Strand 2
B
422 429anti-parallel
Strand 3
A
384 387parallel
Strand 4
A
362 366parallel
Strand 5
A
215 218parallel
Strand 6
A
248 251parallel
Strand 7
A
340 343parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
206 209first strand
Strand 2
B
182 186parallel
Strand 3
B
106 110parallel
Strand 4
B
133 137parallel
Strand 5
B
162 164parallel
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