Analysis of interatomic Contacts of Structural Units in PDB entry:
1AJ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1AJ6 entry

There is 1 chain in PDB entry 1AJ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 12HIS 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 1AJ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 21Right-handed alpha
Helix 2
2
A
23 27Right-handed alpha
Helix 3
3
A
34 52Right-handed alpha
Helix 4
4
A
90 96Right-handed alpha
Helix 5
5
A
120 125Right-handed alpha
Helix 6
6
A
184 198Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1AJ6.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 216first strand
Strand 2
A
203 208anti-parallel
Strand 3
A
59 64parallel
Strand 4
A
68 73anti-parallel
Strand 5
A
164 171anti-parallel
Strand 6
A
127 136anti-parallel
Strand 7
A
139 145anti-parallel
Strand 8
A
155 159anti-parallel
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