Analysis of interatomic Contacts of Structural Units in PDB entry:
1AJ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1AJ8 entry

There are 2 chains in PDB entry 1AJ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 6ARG 376
B
 LEU 6ARG 375
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 1AJ8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 10Right-handed 310
Helix 2
2
A
37 43Right-handed alpha
Helix 3
3
A
46 55Right-handed alpha
Helix 4
4
A
61 74Right-handed alpha
Helix 5
5
A
79 87Right-handed alpha
Helix 6
6
A
94 108Right-handed alpha
Helix 7
7
A
118 144Right-handed alpha
Helix 8
8
A
157 166Right-handed alpha
Helix 9
9
A
172 185Right-handed alpha
Helix 10
10
A
192 203Right-handed alpha
Helix 11
11
A
207 219Right-handed alpha
Helix 12
12
A
224 237Right-handed 310
Helix 13
13
A
240 253Right-handed 310
Helix 14
14
A
270 282Right-handed alpha
Helix 15
15
A
285 301Right-handed alpha
Helix 16
16
A
315 322Right-handed alpha
Helix 17
17
A
326 351Right-handed 310
Helix 18
18
A
372 374Right-handed 310
Helix 19
19
B
37 43Right-handed alpha
Helix 20
20
B
46 55Right-handed alpha
Helix 21
21
B
61 74Right-handed alpha
Helix 22
22
B
79 87Right-handed alpha
Helix 23
23
B
94 108Right-handed alpha
Helix 24
24
B
118 144Right-handed alpha
Helix 25
25
B
157 166Right-handed alpha
Helix 26
26
B
172 185Right-handed alpha
Helix 27
27
B
192 203Right-handed alpha
Helix 28
28
B
207 218Right-handed alpha
Helix 29
29
B
224 237Right-handed 310
Helix 30
30
B
243 252Right-handed alpha
Helix 31
31
B
270 282Right-handed alpha
Helix 32
32
B
285 301Right-handed alpha
Helix 33
33
B
303 305Right-handed 310
Helix 34
34
B
315 322Right-handed alpha
Helix 35
35
B
326 351Right-handed 310
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There are 2 sheets in PDB entry 1AJ8. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 24first strand
Strand 2
A
29 32anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 24first strand
Strand 2
B
29 32anti-parallel
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