Analysis of interatomic Contacts of Structural Units in PDB entry:
1AOR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1AOR entry

There are 2 chains in PDB entry 1AOR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TYR 605
B
 MET 1TYR 605
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 1AOR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 31Right-handed alpha
Helix 2
2
A
34 45Right-handed alpha
Helix 3
3
A
98 104Right-handed alpha
Helix 4
4
A
142 153Right-handed alpha
Helix 5
5
A
165 168Right-handed alpha
Helix 6
6
A
189 196Right-handed alpha
Helix 7
7
A
214 230Right-handed alpha
Helix 8
8
A
232 235Right-handed alpha
Helix 9
9
A
237 241Right-handed alpha
Helix 10
10
A
243 252Right-handed 310
Helix 11
11
A
269 272Right-handed 310
Helix 12
12
A
274 280Right-handed alpha
Helix 13
13
A
312 318Right-handed alpha
Helix 14
14
A
320 322Right-handed 310
Helix 15
15
A
327 340Right-handed alpha
Helix 16
16
A
344 359Right-handed alpha
Helix 17
17
A
365 368Right-handed alpha
Helix 18
18
A
379 390Right-handed 310
Helix 19
19
A
394 401Right-handed 310
Helix 20
20
A
403 410Right-handed alpha
Helix 21
21
A
413 415Right-handed 310
Helix 22
22
A
429 431Right-handed 310
Helix 23
23
A
433 441Right-handed alpha
Helix 24
24
A
449 451Right-handed 310
Helix 25
25
A
454 457Right-handed alpha
Helix 26
26
A
472 491Right-handed alpha
Helix 27
27
A
495 498Right-handed 310
Helix 28
28
A
503 514Right-handed alpha
Helix 29
29
A
520 541Right-handed alpha
Helix 30
30
A
545 548Right-handed alpha
Helix 31
31
A
553 557Right-handed alpha
Helix 32
32
A
572 583Right-handed alpha
Helix 33
33
A
593 599Right-handed alpha
Helix 34
34
A
602 604Right-handed 310
Helix 35
35
B
25 31Right-handed alpha
Helix 36
36
B
34 45Right-handed alpha
Helix 37
37
B
98 105Right-handed alpha
Helix 38
38
B
142 152Right-handed alpha
Helix 39
39
B
165 168Right-handed alpha
Helix 40
40
B
189 196Right-handed alpha
Helix 41
41
B
214 230Right-handed alpha
Helix 42
42
B
232 235Right-handed alpha
Helix 43
43
B
237 241Right-handed alpha
Helix 44
44
B
243 252Right-handed 310
Helix 45
45
B
269 272Right-handed 310
Helix 46
46
B
274 280Right-handed alpha
Helix 47
47
B
312 317Right-handed alpha
Helix 48
48
B
320 322Right-handed 310
Helix 49
49
B
327 340Right-handed alpha
Helix 50
50
B
344 359Right-handed alpha
Helix 51
51
B
365 368Right-handed alpha
Helix 52
52
B
379 390Right-handed 310
Helix 53
53
B
394 401Right-handed 310
Helix 54
54
B
403 410Right-handed alpha
Helix 55
55
B
413 415Right-handed 310
Helix 56
56
B
429 431Right-handed 310
Helix 57
57
B
433 441Right-handed alpha
Helix 58
58
B
449 451Right-handed 310
Helix 59
59
B
454 457Right-handed alpha
Helix 60
60
B
472 491Right-handed alpha
Helix 61
61
B
495 498Right-handed 310
Helix 62
62
B
503 514Right-handed alpha
Helix 63
63
B
520 541Right-handed alpha
Helix 64
64
B
545 548Right-handed alpha
Helix 65
65
B
553 557Right-handed alpha
Helix 66
66
B
572 583Right-handed alpha
Helix 67
67
B
593 598Right-handed alpha
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There are 8 sheets in PDB entry 1AOR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 22first strand
Strand 2
A
7 12anti-parallel
Strand 3
A
109 113parallel
Strand 4
A
59 63anti-parallel
Strand 5
A
77 82anti-parallel
Strand 6
A
89 94anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 133first strand
Strand 2
A
120 125anti-parallel
Strand 3
A
198 204parallel
Strand 4
A
159 162anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 178first strand
Strand 2
A
182 184anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 308first strand
Strand 2
A
296 301anti-parallel
Strand 3
A
282 286anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 22first strand
Strand 2
B
7 12anti-parallel
Strand 3
B
109 113parallel
Strand 4
B
59 63anti-parallel
Strand 5
B
77 82anti-parallel
Strand 6
B
89 94anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 133first strand
Strand 2
B
120 125anti-parallel
Strand 3
B
198 204parallel
Strand 4
B
159 162anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
176 178first strand
Strand 2
B
182 184anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
305 308first strand
Strand 2
B
296 301anti-parallel
Strand 3
B
282 286anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il