Analysis of interatomic Contacts of Structural Units in PDB entry:
1AOV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1AOV entry

There is 1 chain in PDB entry 1AOV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1LYS 686
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 1AOV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 27Right-handed alpha
Helix 2
2
A
42 50Right-handed alpha
Helix 3
3
A
61 68Right-handed alpha
Helix 4
4
A
106 109Right-handed 310
Helix 5
5
A
126 135Right-handed alpha
Helix 6
6
A
149 155Right-handed 310
Helix 7
7
A
169 172Right-handed alpha
Helix 8
8
A
190 199Right-handed alpha
Helix 9
9
A
211 217Right-handed alpha
Helix 10
10
A
221 223Right-handed 310
Helix 11
11
A
236 241Right-handed 310
Helix 12
12
A
260 273Right-handed alpha
Helix 13
13
A
316 319Right-handed alpha
Helix 14
14
A
321 332Right-handed alpha
Helix 15
15
A
352 365Right-handed alpha
Helix 16
16
A
377 385Right-handed alpha
Helix 17
17
A
396 404Right-handed alpha
Helix 18
18
A
445 447Right-handed 310
Helix 19
19
A
465 475Right-handed alpha
Helix 20
20
A
497 499Right-handed 310
Helix 21
21
A
523 533Right-handed alpha
Helix 22
22
A
545 548Right-handed alpha
Helix 23
23
A
556 558Right-handed 310
Helix 24
24
A
563 565Right-handed 310
Helix 25
25
A
598 615Right-handed alpha
Helix 26
26
A
653 671Right-handed alpha
Helix 27
27
A
675 682Right-handed alpha
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There are 8 sheets in PDB entry 1AOV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 11first strand
Strand 2
A
33 38parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 59first strand
Strand 2
A
251 255anti-parallel
Strand 3
A
74 81anti-parallel
Strand 4
A
306 309anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 209first strand
Strand 2
A
94 99anti-parallel
Strand 3
A
224 228anti-parallel
Strand 4
A
232 235anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 115first strand
Strand 2
A
158 160parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 350first strand
Strand 2
A
369 374parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 394first strand
Strand 2
A
593 597anti-parallel
Strand 3
A
407 409anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 414first strand
Strand 2
A
643 646anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
575 577first strand
Strand 2
A
567 569anti-parallel
Strand 3
A
434 437anti-parallel
Strand 4
A
537 540anti-parallel
Strand 5
A
452 455parallel
Strand 6
A
486 489parallel
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