Analysis of interatomic Contacts of Structural Units in PDB entry:
1AQ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1AQ6 entry

There are 2 chains in PDB entry 1AQ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 245
B
 MET 1ALA 245
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1AQ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 26Right-handed 310
Helix 2
2
A
31 52Right-handed alpha
Helix 3
3
A
58 72Right-handed alpha
Helix 4
4
A
79 91Right-handed alpha
Helix 5
5
A
98 105Right-handed alpha
Helix 6
6
A
118 127Right-handed alpha
Helix 7
7
A
131 133Right-handed 310
Helix 8
8
A
140 143Right-handed 310
Helix 9
9
A
150 160Right-handed alpha
Helix 10
10
A
164 166Right-handed 310
Helix 11
11
A
174 183Right-handed alpha
Helix 12
12
A
195 203Right-handed alpha
Helix 13
13
A
209 217Right-handed alpha
Helix 14
14
A
234 243Right-handed 310
Helix 15
15
B
16 26Right-handed 310
Helix 16
16
B
31 52Right-handed alpha
Helix 17
17
B
58 72Right-handed alpha
Helix 18
18
B
79 91Right-handed alpha
Helix 19
19
B
98 105Right-handed alpha
Helix 20
20
B
118 127Right-handed alpha
Helix 21
21
B
131 133Right-handed 310
Helix 22
22
B
140 143Right-handed 310
Helix 23
23
B
150 160Right-handed alpha
Helix 24
24
B
164 166Right-handed 310
Helix 25
25
B
174 183Right-handed alpha
Helix 26
26
B
195 203Right-handed alpha
Helix 27
27
B
209 217Right-handed alpha
Helix 28
28
B
234 241Right-handed 310
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There are 2 sheets in PDB entry 1AQ6. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 231first strand
Strand 2
A
186 190parallel
Strand 3
A
167 171parallel
Strand 4
A
4 7parallel
Strand 5
A
109 114parallel
Strand 6
A
136 139parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
229 231first strand
Strand 2
B
186 190parallel
Strand 3
B
167 171parallel
Strand 4
B
4 7parallel
Strand 5
B
109 114parallel
Strand 6
B
136 139parallel
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