Analysis of interatomic Contacts of Structural Units in PDB entry:
1ATJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ATJ entry

There are 6 chains in PDB entry 1ATJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1SER 306
B
 GLN 1SER 306
C
 GLN 1SER 306
D
 GLN 1SER 306
E
 GLN 1SER 306
F
 GLN 1SER 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are102 helices in PDB entry 1ATJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 26Right-handed alpha
Helix 2
2
A
32 44Right-handed alpha
Helix 3
3
A
52 54Right-handed 310
Helix 4
4
A
64 66Right-handed 310
Helix 5
5
A
77 90Right-handed alpha
Helix 6
6
A
97 111Right-handed alpha
Helix 7
7
A
131 137Right-handed alpha
Helix 8
8
A
145 155Right-handed alpha
Helix 9
9
A
160 171Right-handed alpha
Helix 10
10
A
177 179Right-handed 310
Helix 11
11
A
181 184Right-handed alpha
Helix 12
12
A
187 189Right-handed 310
Helix 13
13
A
199 208Right-handed alpha
Helix 14
14
A
231 239Right-handed 310
Helix 15
15
A
245 252Right-handed alpha
Helix 16
16
A
257 268Right-handed alpha
Helix 17
17
A
270 286Right-handed alpha
Helix 18
18
B
14 26Right-handed alpha
Helix 19
19
B
32 44Right-handed alpha
Helix 20
20
B
52 54Right-handed 310
Helix 21
21
B
64 66Right-handed 310
Helix 22
22
B
77 90Right-handed alpha
Helix 23
23
B
97 111Right-handed alpha
Helix 24
24
B
131 137Right-handed alpha
Helix 25
25
B
145 155Right-handed alpha
Helix 26
26
B
160 171Right-handed alpha
Helix 27
27
B
177 179Right-handed 310
Helix 28
28
B
181 184Right-handed alpha
Helix 29
29
B
187 189Right-handed 310
Helix 30
30
B
199 208Right-handed alpha
Helix 31
31
B
231 239Right-handed 310
Helix 32
32
B
245 252Right-handed alpha
Helix 33
33
B
257 268Right-handed alpha
Helix 34
34
B
270 286Right-handed alpha
Helix 35
35
C
14 26Right-handed alpha
Helix 36
36
C
32 44Right-handed alpha
Helix 37
37
C
52 54Right-handed 310
Helix 38
38
C
64 66Right-handed 310
Helix 39
39
C
77 90Right-handed alpha
Helix 40
40
C
97 111Right-handed alpha
Helix 41
41
C
131 137Right-handed alpha
Helix 42
42
C
145 155Right-handed alpha
Helix 43
43
C
160 171Right-handed alpha
Helix 44
44
C
177 179Right-handed 310
Helix 45
45
C
181 184Right-handed alpha
Helix 46
46
C
187 189Right-handed 310
Helix 47
47
C
199 208Right-handed alpha
Helix 48
48
C
231 239Right-handed 310
Helix 49
49
C
245 252Right-handed alpha
Helix 50
50
C
257 268Right-handed alpha
Helix 51
51
C
270 286Right-handed alpha
Helix 52
52
D
14 26Right-handed alpha
Helix 53
53
D
32 44Right-handed alpha
Helix 54
54
D
52 54Right-handed 310
Helix 55
55
D
64 66Right-handed 310
Helix 56
56
D
77 90Right-handed alpha
Helix 57
57
D
97 111Right-handed alpha
Helix 58
58
D
131 137Right-handed alpha
Helix 59
59
D
145 155Right-handed alpha
Helix 60
60
D
160 171Right-handed alpha
Helix 61
61
D
177 179Right-handed 310
Helix 62
62
D
181 184Right-handed alpha
Helix 63
63
D
187 189Right-handed 310
Helix 64
64
D
199 208Right-handed alpha
Helix 65
65
D
231 239Right-handed 310
Helix 66
66
D
245 252Right-handed alpha
Helix 67
67
D
257 268Right-handed alpha
Helix 68
68
D
270 286Right-handed alpha
Helix 69
69
E
14 26Right-handed alpha
Helix 70
70
E
32 44Right-handed alpha
Helix 71
71
E
52 54Right-handed 310
Helix 72
72
E
64 66Right-handed 310
Helix 73
73
E
77 90Right-handed alpha
Helix 74
74
E
97 111Right-handed alpha
Helix 75
75
E
131 137Right-handed alpha
Helix 76
76
E
145 155Right-handed alpha
Helix 77
77
E
160 171Right-handed alpha
Helix 78
78
E
177 179Right-handed 310
Helix 79
79
E
181 184Right-handed alpha
Helix 80
80
E
187 189Right-handed 310
Helix 81
81
E
199 208Right-handed alpha
Helix 82
82
E
231 239Right-handed 310
Helix 83
83
E
245 252Right-handed alpha
Helix 84
84
E
257 268Right-handed alpha
Helix 85
85
E
270 286Right-handed alpha
Helix 86
86
F
14 26Right-handed alpha
Helix 87
87
F
32 44Right-handed alpha
Helix 88
88
F
52 54Right-handed 310
Helix 89
89
F
64 66Right-handed 310
Helix 90
90
F
77 90Right-handed alpha
Helix 91
91
F
97 111Right-handed alpha
Helix 92
92
F
131 137Right-handed alpha
Helix 93
93
F
145 155Right-handed alpha
Helix 94
94
F
160 171Right-handed alpha
Helix 95
95
F
177 179Right-handed 310
Helix 96
96
F
181 184Right-handed alpha
Helix 97
97
F
187 189Right-handed 310
Helix 98
98
F
199 208Right-handed alpha
Helix 99
99
F
231 239Right-handed 310
Helix 100
100
F
245 252Right-handed alpha
Helix 101
101
F
257 268Right-handed alpha
Helix 102
102
F
270 286Right-handed alpha
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There are 6 sheets in PDB entry 1ATJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 176first strand
Strand 2
A
218 220anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
174 176first strand
Strand 2
B
218 220anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
174 176first strand
Strand 2
C
218 220anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
174 176first strand
Strand 2
D
218 220anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
174 176first strand
Strand 2
E
218 220anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
174 176first strand
Strand 2
F
218 220anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il