Analysis of interatomic Contacts of Structural Units in PDB entry:
1AVH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1AVH entry

There are 2 chains in PDB entry 1AVH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 3ASP 320
B
 GLN 3ASP 320
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 40 helices in PDB entry 1AVH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 29Right-handed alpha
Helix 2
2
A
34 43Right-handed alpha
Helix 3
3
A
46 61Right-handed alpha
Helix 4
4
A
64 73Right-handed alpha
Helix 5
5
A
74 85Right-handed alpha
Helix 6
6
A
87 101Right-handed alpha
Helix 7
7
A
106 117Right-handed alpha
Helix 8
8
A
118 134Right-handed alpha
Helix 9
9
A
136 145Right-handed alpha
Helix 10
10
A
147 158Right-handed alpha
Helix 11
11
A
168 185Right-handed alpha
Helix 12
12
A
190 201Right-handed alpha
Helix 13
13
A
202 217Right-handed alpha
Helix 14
14
A
220 225Right-handed 310
Helix 15
15
A
231 247Right-handed alpha
Helix 16
16
A
246 259Right-handed alpha
Helix 17
17
A
265 276Right-handed alpha
Helix 18
18
A
280 293Right-handed alpha
Helix 19
19
A
295 304Right-handed alpha
Helix 20
20
A
306 317Right-handed alpha
Helix 21
21
B
16 28Right-handed alpha
Helix 22
22
B
34 45Right-handed alpha
Helix 23
23
B
46 61Right-handed alpha
Helix 24
24
B
64 71Right-handed alpha
Helix 25
25
B
74 85Right-handed alpha
Helix 26
26
B
87 99Right-handed alpha
Helix 27
27
B
106 117Right-handed alpha
Helix 28
28
B
118 133Right-handed alpha
Helix 29
29
B
136 145Right-handed alpha
Helix 30
30
B
147 158Right-handed alpha
Helix 31
31
B
168 185Right-handed alpha
Helix 32
32
B
190 201Right-handed alpha
Helix 33
33
B
202 218Right-handed alpha
Helix 34
34
B
220 225Right-handed 310
Helix 35
35
B
231 246Right-handed alpha
Helix 36
36
B
246 258Right-handed alpha
Helix 37
37
B
265 276Right-handed alpha
Helix 38
38
B
280 293Right-handed alpha
Helix 39
39
B
295 304Right-handed alpha
Helix 40
40
B
306 317Right-handed alpha
Back to top of page
There are no sheets in PDB entry 1AVH
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il