Analysis of interatomic Contacts of Structural Units in PDB entry:
1AWR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1AWR entry

There are 12 chains in PDB entry 1AWR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 1002GLU 1165
B
 VAL 1002GLU 1165
C
 VAL 1002GLU 1165
D
 VAL 1002GLU 1165
E
 VAL 1002GLU 1165
F
 VAL 1002GLU 1165
G
 HIS 101ALA 106
H
 HIS 101ALA 106
I
 HIS 101ALA 106
J
 HIS 101ALA 106
K
 HIS 101ALA 106
L
 HIS 101ALA 106
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 1AWR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1030 1041Right-handed alpha
Helix 2
2
A
1120 1122Right-handed 310
Helix 3
3
A
1136 1145Right-handed alpha
Helix 4
4
B
1030 1041Right-handed alpha
Helix 5
5
B
1120 1122Right-handed 310
Helix 6
6
B
1136 1139Right-handed alpha
Helix 7
7
C
1030 1041Right-handed alpha
Helix 8
8
C
1120 1122Right-handed 310
Helix 9
9
C
1136 1145Right-handed alpha
Helix 10
10
D
1030 1041Right-handed alpha
Helix 11
11
D
1120 1122Right-handed 310
Helix 12
12
D
1136 1145Right-handed alpha
Helix 13
13
E
1030 1041Right-handed alpha
Helix 14
14
E
1120 1122Right-handed 310
Helix 15
15
E
1136 1145Right-handed alpha
Helix 16
16
F
1030 1041Right-handed alpha
Helix 17
17
F
1120 1122Right-handed 310
Helix 18
18
F
1136 1139Right-handed alpha
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There are 6 sheets in PDB entry 1AWR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1055 1057first strand
Strand 2
A
1061 1064anti-parallel
Strand 3
A
1112 1115anti-parallel
Strand 4
A
1097 1100anti-parallel
Strand 5
A
1128 1134anti-parallel
Strand 6
A
1015 1024anti-parallel
Strand 7
A
1005 1012anti-parallel
Strand 8
A
1156 1163anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1156 1163first strand
Strand 2
B
1005 1012anti-parallel
Strand 3
B
1015 1024anti-parallel
Strand 4
B
1128 1132anti-parallel
Strand 5
B
1097 1100anti-parallel
Strand 6
B
1112 1115anti-parallel
Strand 7
B
1061 1064anti-parallel
Strand 8
B
1055 1057anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1055 1057first strand
Strand 2
C
1061 1064anti-parallel
Strand 3
C
1112 1115anti-parallel
Strand 4
C
1097 1100anti-parallel
Strand 5
C
1128 1134anti-parallel
Strand 6
C
1015 1024anti-parallel
Strand 7
C
1005 1012anti-parallel
Strand 8
C
1156 1163anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
1055 1057first strand
Strand 2
D
1061 1064anti-parallel
Strand 3
D
1112 1115anti-parallel
Strand 4
D
1097 1100anti-parallel
Strand 5
D
1128 1134anti-parallel
Strand 6
D
1015 1024anti-parallel
Strand 7
D
1005 1012anti-parallel
Strand 8
D
1156 1163anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1055 1057first strand
Strand 2
E
1061 1064anti-parallel
Strand 3
E
1112 1115anti-parallel
Strand 4
E
1097 1100anti-parallel
Strand 5
E
1128 1134anti-parallel
Strand 6
E
1015 1024anti-parallel
Strand 7
E
1005 1012anti-parallel
Strand 8
E
1156 1163anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
1156 1163first strand
Strand 2
F
1005 1012anti-parallel
Strand 3
F
1015 1024anti-parallel
Strand 4
F
1128 1132anti-parallel
Strand 5
F
1097 1100anti-parallel
Strand 6
F
1112 1115anti-parallel
Strand 7
F
1061 1064anti-parallel
Strand 8
F
1055 1057anti-parallel
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