Analysis of interatomic Contacts of Structural Units in PDB entry:
1B06


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1B06 entry

There are 6 chains in PDB entry 1B06 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3LYS 210
B
 VAL 3LYS 210
C
 VAL 3LYS 210
D
 VAL 3LYS 210
E
 VAL 3LYS 210
F
 VAL 3LYS 210
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 1B06. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
46
A
27 35Right-handed alpha
Helix 2
47
A
37 57Right-handed alpha
Helix 3
48
A
67 89Right-handed alpha
Helix 4
49
A
103 113Right-handed alpha
Helix 5
50
A
116 129Right-handed alpha
Helix 6
51
A
173 175Right-handed 310
Helix 7
52
A
177 180Right-handed alpha
Helix 8
44
A
184 194Right-handed alpha
Helix 9
54
A
197 205Right-handed alpha
Helix 10
46
B
27 35Right-handed alpha
Helix 11
47
B
37 57Right-handed alpha
Helix 12
48
B
67 89Right-handed alpha
Helix 13
49
B
103 113Right-handed alpha
Helix 14
50
B
116 129Right-handed alpha
Helix 15
51
B
173 175Right-handed 310
Helix 16
52
B
177 180Right-handed alpha
Helix 17
53
B
184 193Right-handed alpha
Helix 18
54
B
197 205Right-handed alpha
Helix 19
46
C
27 35Right-handed alpha
Helix 20
47
C
37 57Right-handed alpha
Helix 21
48
C
67 89Right-handed alpha
Helix 22
49
C
103 113Right-handed alpha
Helix 23
50
C
116 129Right-handed alpha
Helix 24
51
C
173 175Right-handed 310
Helix 25
52
C
177 180Right-handed alpha
Helix 26
44
C
184 194Right-handed alpha
Helix 27
54
C
197 205Right-handed alpha
Helix 28
46
D
27 35Right-handed alpha
Helix 29
47
D
37 57Right-handed alpha
Helix 30
48
D
67 89Right-handed alpha
Helix 31
49
D
103 113Right-handed alpha
Helix 32
50
D
116 129Right-handed alpha
Helix 33
51
D
173 175Right-handed 310
Helix 34
52
D
177 180Right-handed alpha
Helix 35
44
D
184 194Right-handed alpha
Helix 36
54
D
197 205Right-handed alpha
Helix 37
46
E
27 35Right-handed alpha
Helix 38
47
E
37 57Right-handed alpha
Helix 39
48
E
67 89Right-handed alpha
Helix 40
49
E
103 113Right-handed alpha
Helix 41
50
E
116 129Right-handed alpha
Helix 42
51
E
173 175Right-handed 310
Helix 43
52
E
177 180Right-handed alpha
Helix 44
44
E
184 194Right-handed alpha
Helix 45
54
E
197 205Right-handed alpha
Helix 46
46
F
27 35Right-handed alpha
Helix 47
47
F
37 57Right-handed alpha
Helix 48
48
F
67 89Right-handed alpha
Helix 49
49
F
103 113Right-handed alpha
Helix 50
50
F
116 129Right-handed alpha
Helix 51
51
F
173 175Right-handed 310
Helix 52
52
F
177 180Right-handed alpha
Helix 53
53
F
184 193Right-handed alpha
Helix 54
54
F
197 205Right-handed alpha
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There are 6 sheets in PDB entry 1B06. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 153first strand
Strand 2
A
134 140anti-parallel
Strand 3
A
164 170anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 153first strand
Strand 2
B
134 140anti-parallel
Strand 3
B
164 170anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
147 153first strand
Strand 2
C
134 140anti-parallel
Strand 3
C
164 170anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
147 153first strand
Strand 2
D
134 140anti-parallel
Strand 3
D
164 170anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
147 153first strand
Strand 2
E
134 140anti-parallel
Strand 3
E
164 170anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
147 153first strand
Strand 2
F
134 140anti-parallel
Strand 3
F
164 170anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il