Analysis of interatomic Contacts of Structural Units in PDB entry:
1B0A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1B0A entry

There is 1 chain in PDB entry 1B0A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLU 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1B0A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
H1
A
8 29Right-handed alpha
Helix 2
H2
A
45 61Right-handed alpha
Helix 3
H3
A
76 89Right-handed alpha
Helix 4
H4
A
106 113Right-handed alpha
Helix 5
H5
A
124 133Right-handed alpha
Helix 6
H6
A
141 154Right-handed alpha
Helix 7
H7
A
172 182Right-handed alpha
Helix 8
H8
A
196 202Right-handed alpha
Helix 9
H9
A
217 221Right-handed 310
Helix 10
H10
A
246 252Right-handed alpha
Helix 11
H11
A
259 282Right-handed alpha
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There are 3 sheets in PDB entry 1B0A. Click on sheet of interest to get list of strands forming it: S1, S2, S3,

There are 6 strands in S1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 6first strand
Strand 2
A
159 166parallel
Strand 3
A
184 190parallel
Strand 4
A
204 209parallel
Strand 5
A
225 230parallel
Strand 6
A
254 257parallel
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There are 3 strands in S2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 42first strand
Strand 2
A
64 71parallel
Strand 3
A
93 98parallel
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There are 2 strands in S3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 235first strand
Strand 2
A
239 242anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il