Analysis of interatomic Contacts of Structural Units in PDB entry:
1B0L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1B0L entry

There is 1 chain in PDB entry 1B0L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1LYS 691
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 1B0L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
N1
A
12 31Right-handed alpha
Helix 2
N2
A
41 53Right-handed alpha
Helix 3
N3
A
60 69Right-handed alpha
Helix 4
N5
A
121 136Right-handed alpha
Helix 5
N6
A
144 153Right-handed alpha
Helix 6
N7
A
190 203Right-handed alpha
Helix 7
N8
A
212 218Right-handed alpha
Helix 8
N8A
A
222 227Right-handed 310
Helix 9
N9
A
263 279Right-handed alpha
Helix 10
N10
A
315 321Right-handed alpha
Helix 11
N11
A
321 333Right-handed alpha
Helix 12
N12
A
334 344Right-handed alpha
Helix 13
C1
A
351 365Right-handed alpha
Helix 14
C2
A
376 388Right-handed alpha
Helix 15
C3
A
395 407Right-handed alpha
Helix 16
C4
A
449 453Right-handed 310
Helix 17
C5
A
465 481Right-handed alpha
Helix 18
C6
A
484 488Right-handed 310
Helix 19
C7
A
526 539Right-handed alpha
Helix 20
C8
A
546 554Right-handed alpha
Helix 21
C8A
A
567 571Right-handed 310
Helix 22
C9
A
605 621Right-handed alpha
Helix 23
C10
A
658 664Right-handed alpha
Helix 24
C11
A
664 678Right-handed alpha
Helix 25
C12
A
680 691Right-handed alpha
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There are 8 sheets in PDB entry 1B0L. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 10first strand
Strand 2
A
34 38parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 59first strand
Strand 2
A
254 258anti-parallel
Strand 3
A
74 81anti-parallel
Strand 4
A
306 309anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 251first strand
Strand 2
A
91 98anti-parallel
Strand 3
A
206 210anti-parallel
Strand 4
A
113 116parallel
Strand 5
A
155 158parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 99first strand
Strand 2
A
227 230anti-parallel
Strand 3
A
236 238anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 350first strand
Strand 2
A
369 374parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 394first strand
Strand 2
A
598 601anti-parallel
Strand 3
A
408 415anti-parallel
Strand 4
A
647 652anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
592 594first strand
Strand 2
A
435 440anti-parallel
Strand 3
A
542 546anti-parallel
Strand 4
A
458 460parallel
Strand 5
A
492 494parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
440 442first strand
Strand 2
A
571 574anti-parallel
Strand 3
A
580 582anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il