Analysis of interatomic Contacts of Structural Units in PDB entry:
1B63


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1B63 entry

There is 1 chain in PDB entry 1B63 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -2GLN 331
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 1B63. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 19Right-handed alpha
Helix 2
2
A
23 36Right-handed alpha
Helix 3
3
A
48 50Right-handed 310
Helix 4
4
A
65 72Right-handed 310
Helix 5
5
A
83 88Right-handed alpha
Helix 6
6
A
98 105Right-handed alpha
Helix 7
7
A
155 160Right-handed alpha
Helix 8
8
A
164 181Right-handed alpha
Helix 9
9
A
208 216Right-handed 310
Helix 10
10
A
218 223Right-handed alpha
Helix 11
11
A
243 245Right-handed 310
Helix 12
12
A
250 252Right-handed 310
Helix 13
13
A
266 279Right-handed alpha
Helix 14
14
A
296 298Right-handed 310
Helix 15
15
A
315 329Right-handed alpha
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There are 2 sheets in PDB entry 1B63. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 137first strand
Strand 2
A
120 126anti-parallel
Strand 3
A
107 113anti-parallel
Strand 4
A
142 148anti-parallel
Strand 5
A
53 58anti-parallel
Strand 6
A
41 47anti-parallel
Strand 7
A
186 191parallel
Strand 8
A
194 199anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 231first strand
Strand 2
A
234 241anti-parallel
Strand 3
A
288 293anti-parallel
Strand 4
A
254 258parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il