Analysis of interatomic Contacts of Structural Units in PDB entry:
1B65


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1B65 entry

There are 6 chains in PDB entry 1B65 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 9ALA 375
B
 LYS 9ALA 375
C
 LYS 9ALA 375
D
 LYS 9ALA 375
E
 LYS 9ALA 375
F
 LYS 9ALA 375
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 90 helices in PDB entry 1B65. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 15Right-handed 310
Helix 2
2
A
29 31Right-handed 310
Helix 3
3
A
90 95Right-handed alpha
Helix 4
4
A
108 125Right-handed 310
Helix 5
5
A
127 130Right-handed alpha
Helix 6
6
A
153 155Right-handed 310
Helix 7
7
A
160 168Right-handed alpha
Helix 8
8
A
181 183Right-handed 310
Helix 9
9
A
222 224Right-handed 310
Helix 10
10
A
232 235Right-handed alpha
Helix 11
11
A
241 244Right-handed alpha
Helix 12
12
A
263 280Right-handed alpha
Helix 13
13
A
304 306Right-handed 310
Helix 14
14
A
319 342Right-handed 310
Helix 15
15
A
361 371Right-handed alpha
Helix 16
16
B
12 15Right-handed 310
Helix 17
17
B
29 31Right-handed 310
Helix 18
18
B
90 96Right-handed alpha
Helix 19
19
B
108 125Right-handed 310
Helix 20
20
B
127 130Right-handed alpha
Helix 21
21
B
153 155Right-handed 310
Helix 22
22
B
160 168Right-handed alpha
Helix 23
23
B
181 183Right-handed 310
Helix 24
24
B
222 224Right-handed 310
Helix 25
25
B
232 235Right-handed alpha
Helix 26
26
B
241 244Right-handed alpha
Helix 27
27
B
263 280Right-handed alpha
Helix 28
28
B
304 306Right-handed 310
Helix 29
29
B
319 342Right-handed 310
Helix 30
30
B
361 371Right-handed alpha
Helix 31
31
C
13 15Right-handed 310
Helix 32
32
C
29 31Right-handed 310
Helix 33
33
C
90 95Right-handed alpha
Helix 34
34
C
108 125Right-handed 310
Helix 35
35
C
127 130Right-handed alpha
Helix 36
36
C
153 155Right-handed 310
Helix 37
37
C
160 168Right-handed alpha
Helix 38
38
C
181 183Right-handed 310
Helix 39
39
C
222 224Right-handed 310
Helix 40
40
C
232 235Right-handed alpha
Helix 41
41
C
241 244Right-handed alpha
Helix 42
42
C
263 280Right-handed alpha
Helix 43
43
C
304 306Right-handed 310
Helix 44
44
C
319 342Right-handed 310
Helix 45
45
C
361 371Right-handed alpha
Helix 46
46
D
12 15Right-handed 310
Helix 47
47
D
29 31Right-handed 310
Helix 48
48
D
90 96Right-handed alpha
Helix 49
49
D
108 125Right-handed 310
Helix 50
50
D
127 130Right-handed alpha
Helix 51
51
D
153 155Right-handed 310
Helix 52
52
D
160 168Right-handed alpha
Helix 53
53
D
181 183Right-handed 310
Helix 54
54
D
222 224Right-handed 310
Helix 55
55
D
232 235Right-handed alpha
Helix 56
56
D
241 244Right-handed alpha
Helix 57
57
D
263 280Right-handed alpha
Helix 58
58
D
304 306Right-handed 310
Helix 59
59
D
319 342Right-handed 310
Helix 60
60
D
361 371Right-handed alpha
Helix 61
61
E
12 15Right-handed 310
Helix 62
62
E
29 31Right-handed 310
Helix 63
63
E
90 96Right-handed alpha
Helix 64
64
E
108 125Right-handed 310
Helix 65
65
E
127 130Right-handed alpha
Helix 66
66
E
153 155Right-handed 310
Helix 67
67
E
160 168Right-handed alpha
Helix 68
68
E
181 183Right-handed 310
Helix 69
69
E
222 224Right-handed 310
Helix 70
70
E
232 235Right-handed alpha
Helix 71
71
E
241 244Right-handed alpha
Helix 72
72
E
263 280Right-handed alpha
Helix 73
73
E
304 306Right-handed 310
Helix 74
74
E
319 342Right-handed 310
Helix 75
75
E
361 371Right-handed alpha
Helix 76
76
F
13 15Right-handed 310
Helix 77
77
F
29 31Right-handed 310
Helix 78
78
F
90 96Right-handed alpha
Helix 79
79
F
108 125Right-handed 310
Helix 80
80
F
127 130Right-handed alpha
Helix 81
81
F
153 155Right-handed 310
Helix 82
82
F
160 168Right-handed alpha
Helix 83
83
F
181 183Right-handed 310
Helix 84
84
F
222 224Right-handed 310
Helix 85
85
F
232 235Right-handed alpha
Helix 86
86
F
241 244Right-handed alpha
Helix 87
87
F
263 280Right-handed alpha
Helix 88
88
F
304 306Right-handed 310
Helix 89
89
F
319 342Right-handed 310
Helix 90
90
F
361 371Right-handed alpha
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There are 12 sheets in PDB entry 1B65. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 43first strand
Strand 2
A
56 63anti-parallel
Strand 3
A
103 107anti-parallel
Strand 4
A
141 145parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 204first strand
Strand 2
A
207 217anti-parallel
Strand 3
A
251 257anti-parallel
Strand 4
A
289 296parallel
Strand 5
A
76 83anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 43first strand
Strand 2
B
56 63anti-parallel
Strand 3
B
103 107anti-parallel
Strand 4
B
141 145parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 204first strand
Strand 2
B
207 217anti-parallel
Strand 3
B
251 257anti-parallel
Strand 4
B
289 296parallel
Strand 5
B
76 83anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
36 43first strand
Strand 2
C
56 63anti-parallel
Strand 3
C
103 107anti-parallel
Strand 4
C
141 145parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
194 204first strand
Strand 2
C
207 217anti-parallel
Strand 3
C
251 257anti-parallel
Strand 4
C
289 296parallel
Strand 5
C
76 83anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
36 43first strand
Strand 2
D
56 63anti-parallel
Strand 3
D
103 107anti-parallel
Strand 4
D
141 145parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
194 204first strand
Strand 2
D
207 217anti-parallel
Strand 3
D
251 257anti-parallel
Strand 4
D
289 296parallel
Strand 5
D
76 83anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
36 43first strand
Strand 2
E
56 63anti-parallel
Strand 3
E
103 107anti-parallel
Strand 4
E
141 145parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
194 204first strand
Strand 2
E
207 217anti-parallel
Strand 3
E
251 257anti-parallel
Strand 4
E
289 296parallel
Strand 5
E
76 83anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
36 43first strand
Strand 2
F
56 63anti-parallel
Strand 3
F
103 107anti-parallel
Strand 4
F
141 145parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
194 204first strand
Strand 2
F
207 217anti-parallel
Strand 3
F
251 257anti-parallel
Strand 4
F
289 296parallel
Strand 5
F
76 83anti-parallel
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