Analysis of interatomic Contacts of Structural Units in PDB entry:
1B7E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1B7E entry

There is 1 chain in PDB entry 1B7E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 70GLN 472
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 1B7E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
H1
A
71 86Right-handed alpha
Helix 2
H2
A
154 162Right-handed alpha
Helix 3
H3
A
164 182Right-handed alpha
Helix 4
H4
A
193 203Right-handed alpha
Helix 5
H5
A
224 229Right-handed alpha
Helix 6
H6
A
309 336Right-handed alpha
Helix 7
H8
A
382 388Right-handed alpha
Helix 8
H9
A
399 408Right-handed alpha
Helix 9
H10
A
422 433Right-handed alpha
Helix 10
H11
A
446 469Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 1B7E.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 241first strand
Strand 2
A
259 271anti-parallel
Strand 3
A
278 286anti-parallel
Strand 4
A
297 302anti-parallel
Strand 5
A
206 211anti-parallel
Strand 6
A
183 189parallel
Strand 7
A
92 100parallel
Strand 8
A
125 133anti-parallel
Strand 9
A
141 148anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il