Analysis of interatomic Contacts of Structural Units in PDB entry:
1B8D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1B8D entry

There are 7 chains in PDB entry 1B8D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1CYS 164
B
 MET 1GLY 71
B
 CYS 73ASP 177
K
 MET 1CYS 164
L
 MET 1GLY 71
L
 CYS 73ASP 177
G
 GLY 1UNK 100
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 34 helices in PDB entry 1B8D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
18
A
4 14Right-handed alpha
Helix 2
19
A
21 62Right-handed alpha
Helix 3
20
A
64 67Right-handed 310
Helix 4
21
A
76 99Right-handed alpha
Helix 5
22
A
103 108Right-handed alpha
Helix 6
6
A
113 119Right-handed alpha
Helix 7
24
A
124 137Right-handed alpha
Helix 8
25
A
146 163Right-handed alpha
Helix 9
26
B
4 15Right-handed alpha
Helix 10
27
B
22 32Right-handed alpha
Helix 11
28
B
34 62Right-handed alpha
Helix 12
29
B
64 67Right-handed 310
Helix 13
30
B
76 99Right-handed alpha
Helix 14
31
B
103 108Right-handed alpha
Helix 15
32
B
113 120Right-handed alpha
Helix 16
16
B
124 142Right-handed alpha
Helix 17
34
B
159 176Right-handed alpha
Helix 18
18
K
4 14Right-handed alpha
Helix 19
19
K
21 62Right-handed alpha
Helix 20
20
K
64 67Right-handed 310
Helix 21
21
K
76 99Right-handed alpha
Helix 22
22
K
103 108Right-handed alpha
Helix 23
23
K
113 120Right-handed alpha
Helix 24
24
K
124 137Right-handed alpha
Helix 25
25
K
146 163Right-handed alpha
Helix 26
26
L
4 15Right-handed alpha
Helix 27
27
L
22 32Right-handed alpha
Helix 28
28
L
34 62Right-handed alpha
Helix 29
29
L
64 67Right-handed 310
Helix 30
30
L
76 99Right-handed alpha
Helix 31
31
L
103 108Right-handed alpha
Helix 32
32
L
113 120Right-handed alpha
Helix 33
33
L
124 143Right-handed alpha
Helix 34
34
L
159 176Right-handed alpha
Back to top of page
There are no sheets in PDB entry 1B8D
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il