Analysis of interatomic Contacts of Structural Units in PDB entry:
1B8G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1B8G entry

There are 2 chains in PDB entry 1B8G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 3GLY 430
B
 MET 3GLU 431
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 1B8G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 28Right-handed alpha
Helix 2
2
A
52 61Right-handed alpha
Helix 3
3
A
65 67Right-handed 310
Helix 4
4
A
76 81Right-handed alpha
Helix 5
5
A
89 102Right-handed alpha
Helix 6
6
A
111 113Right-handed 310
Helix 7
7
A
119 131Right-handed alpha
Helix 8
8
A
146 151Right-handed 310
Helix 9
9
A
167 169Right-handed 310
Helix 10
10
A
175 187Right-handed alpha
Helix 11
11
A
210 223Right-handed alpha
Helix 12
12
A
234 236Right-handed 310
Helix 13
13
A
246 252Right-handed alpha
Helix 14
14
A
261 263Right-handed 310
Helix 15
15
A
278 280Right-handed 310
Helix 16
16
A
290 303Right-handed alpha
Helix 17
17
A
307 318Right-handed alpha
Helix 18
18
A
320 348Right-handed alpha
Helix 19
19
A
366 368Right-handed 310
Helix 20
20
A
374 386Right-handed alpha
Helix 21
21
A
395 398Right-handed 310
Helix 22
22
A
415 428Right-handed alpha
Helix 23
23
B
18 29Right-handed 310
Helix 24
24
B
52 61Right-handed alpha
Helix 25
25
B
65 67Right-handed 310
Helix 26
26
B
76 81Right-handed alpha
Helix 27
27
B
89 102Right-handed alpha
Helix 28
28
B
111 113Right-handed 310
Helix 29
29
B
120 131Right-handed alpha
Helix 30
30
B
146 151Right-handed 310
Helix 31
31
B
167 169Right-handed 310
Helix 32
32
B
175 187Right-handed alpha
Helix 33
33
B
210 223Right-handed alpha
Helix 34
34
B
234 236Right-handed 310
Helix 35
35
B
246 252Right-handed alpha
Helix 36
36
B
261 263Right-handed 310
Helix 37
37
B
278 280Right-handed 310
Helix 38
38
B
290 303Right-handed alpha
Helix 39
39
B
307 318Right-handed alpha
Helix 40
40
B
320 348Right-handed alpha
Helix 41
41
B
366 368Right-handed 310
Helix 42
42
B
374 386Right-handed alpha
Helix 43
43
B
395 398Right-handed 310
Helix 44
44
B
415 429Right-handed alpha
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There are 4 sheets in PDB entry 1B8G. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 118first strand
Strand 2
A
282 287anti-parallel
Strand 3
A
265 270anti-parallel
Strand 4
A
226 230parallel
Strand 5
A
191 198parallel
Strand 6
A
136 141parallel
Strand 7
A
159 163parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 364first strand
Strand 2
A
405 409anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 118first strand
Strand 2
B
282 287anti-parallel
Strand 3
B
265 270anti-parallel
Strand 4
B
226 230parallel
Strand 5
B
191 198parallel
Strand 6
B
136 141parallel
Strand 7
B
159 163parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
360 364first strand
Strand 2
B
405 409anti-parallel
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