Analysis of interatomic Contacts of Structural Units in PDB entry:
1BE3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1BE3 entry

There are 11 chains in PDB entry 1BE3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 1PHE 446
B
 PRO 21LEU 439
C
 MET 1TRP 379
D
 SER 1LYS 241
E
 SER 1GLY 196
F
 ALA 5LYS 110
G
 GLY 1ARG 81
H
 ASP 15LYS 78
I
 LYS 46TYR 78
J
 VAL 1LYS 62
K
 ARG 15THR 36
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 88 helices in PDB entry 1BE3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 9Right-handed alpha
Helix 2
2
A
51 62Right-handed 310
Helix 3
3
A
72 82Right-handed 310
Helix 4
4
A
103 118Right-handed 310
Helix 5
5
A
124 143Right-handed alpha
Helix 6
6
A
145 157Right-handed alpha
Helix 7
7
A
162 164Right-handed 310
Helix 8
8
A
171 176Right-handed alpha
Helix 9
9
A
179 190Right-handed alpha
Helix 10
10
A
205 211Right-handed alpha
Helix 11
11
A
224 226Right-handed 310
Helix 12
12
A
265 277Right-handed 310
Helix 13
13
A
287 289Right-handed 310
Helix 14
14
A
293 300Right-handed alpha
Helix 15
15
A
331 348Right-handed alpha
Helix 16
16
A
351 369Right-handed alpha
Helix 17
17
A
372 385Right-handed alpha
Helix 18
18
A
392 401Right-handed alpha
Helix 19
19
A
404 414Right-handed alpha
Helix 20
20
A
434 441Right-handed alpha
Helix 21
21
B
55 57Right-handed 310
Helix 22
22
B
65 71Right-handed alpha
Helix 23
23
B
82 92Right-handed alpha
Helix 24
24
B
113 128Right-handed 310
Helix 25
25
B
134 153Right-handed alpha
Helix 26
26
B
155 167Right-handed alpha
Helix 27
27
B
183 185Right-handed 310
Helix 28
28
B
188 198Right-handed alpha
Helix 29
29
B
201 203Right-handed 310
Helix 30
30
B
213 223Right-handed alpha
Helix 31
31
B
267 279Right-handed alpha
Helix 32
32
B
294 302Right-handed alpha
Helix 33
33
B
333 348Right-handed alpha
Helix 34
34
B
354 372Right-handed 310
Helix 35
35
B
375 388Right-handed alpha
Helix 36
36
B
395 404Right-handed alpha
Helix 37
37
B
407 418Right-handed alpha
Helix 38
38
C
5 8Right-handed alpha
Helix 39
39
C
10 18Right-handed alpha
Helix 40
40
C
29 31Right-handed 310
Helix 41
41
C
33 53Right-handed alpha
Helix 42
42
C
62 72Right-handed alpha
Helix 43
43
C
76 104Right-handed alpha
Helix 44
44
C
106 108Right-handed 310
Helix 45
45
C
110 133Right-handed alpha
Helix 46
46
C
137 152Right-handed alpha
Helix 47
47
C
157 165Right-handed alpha
Helix 48
48
C
172 202Right-handed alpha
Helix 49
49
C
214 216Right-handed 310
Helix 50
50
C
222 244Right-handed alpha
Helix 51
51
C
272 282Right-handed alpha
Helix 52
52
C
287 307Right-handed alpha
Helix 53
53
C
315 317Right-handed 310
Helix 54
54
C
319 340Right-handed alpha
Helix 55
55
C
345 363Right-handed alpha
Helix 56
56
C
365 376Right-handed alpha
Helix 57
57
D
23 36Right-handed alpha
Helix 58
58
D
58 71Right-handed alpha
Helix 59
59
D
74 76Right-handed 310
Helix 60
60
D
98 104Right-handed alpha
Helix 61
61
D
113 115Right-handed 310
Helix 62
62
D
123 131Right-handed alpha
Helix 63
63
D
179 194Right-handed alpha
Helix 64
64
D
196 201Right-handed 310
Helix 65
65
D
204 231Right-handed alpha
Helix 66
66
E
16 18Right-handed 310
Helix 67
67
E
26 62Right-handed alpha
Helix 68
68
E
66 73Right-handed alpha
Helix 69
69
E
103 111Right-handed alpha
Helix 70
70
E
123 125Right-handed 310
Helix 71
71
E
151 153Right-handed 310
Helix 72
72
F
13 23Right-handed alpha
Helix 73
73
F
25 29Right-handed 310
Helix 74
74
F
33 36Right-handed 310
Helix 75
75
F
41 49Right-handed alpha
Helix 76
76
F
52 71Right-handed alpha
Helix 77
77
F
77 79Right-handed 310
Helix 78
78
F
89 108Right-handed alpha
Helix 79
79
G
20 22Right-handed 310
Helix 80
80
G
29 71Right-handed alpha
Helix 81
81
H
16 26Right-handed alpha
Helix 82
82
H
28 40Right-handed alpha
Helix 83
83
H
50 52Right-handed 310
Helix 84
84
H
55 76Right-handed alpha
Helix 85
85
J
5 13Right-handed alpha
Helix 86
86
J
17 47Right-handed alpha
Helix 87
87
J
52 55Right-handed alpha
Helix 88
88
K
16 34Right-handed alpha
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There are 10 sheets in PDB entry 1BE3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 29first strand
Strand 2
A
196 201parallel
Strand 3
A
34 39anti-parallel
Strand 4
A
95 102anti-parallel
Strand 5
A
85 90anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 243first strand
Strand 2
A
421 425parallel
Strand 3
A
251 256anti-parallel
Strand 4
A
318 326anti-parallel
Strand 5
A
306 313anti-parallel
Strand 6
A
279 281anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 37first strand
Strand 2
B
205 208parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 51first strand
Strand 2
B
105 112anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
243 247first strand
Strand 2
B
423 428parallel
Strand 3
B
252 260anti-parallel
Strand 4
B
320 329anti-parallel
Strand 5
B
308 315anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
22 24first strand
Strand 2
C
217 219anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
89 91first strand
Strand 2
E
94 100anti-parallel
Strand 3
E
132 136anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
156 158first strand
Strand 2
E
163 165anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
185 187first strand
Strand 2
E
193 195anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
67 69first strand
Strand 2
I
74 76anti-parallel
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