Analysis of interatomic Contacts of Structural Units in PDB entry:
1BEP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1BEP entry

There is 1 chain in PDB entry 1BEP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 4LEU 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1BEP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 32Right-handed alpha
Helix 2
2
A
36 39Right-handed alpha
Helix 3
3
A
43 54Right-handed alpha
Helix 4
4
A
70 72Right-handed 310
Helix 5
5
A
74 77Right-handed alpha
Helix 6
6
A
80 82Right-handed 310
Helix 7
7
A
85 98Right-handed 310
Helix 8
8
A
104 118Right-handed alpha
Helix 9
9
A
135 137Right-handed 310
Helix 10
10
A
151 161Right-handed alpha
Helix 11
11
A
165 176Right-handed alpha
Helix 12
12
A
182 185Right-handed alpha
Helix 13
13
A
201 208Right-handed alpha
Helix 14
14
A
233 240Right-handed alpha
Helix 15
15
A
242 253Right-handed alpha
Helix 16
16
A
255 271Right-handed alpha
Helix 17
17
A
289 292Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1BEP.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 215first strand
Strand 2
A
221 225anti-parallel
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