Analysis of interatomic Contacts of Structural Units in PDB entry:
1BEV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1BEV entry

There are 4 chains in PDB entry 1BEV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
1
 GLN 14TYR 281
2
 GLU 5GLN 248
3
 GLY 1GLN 242
4
 SER 23LYS 62
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1BEV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
1
41 43Right-handed 310
Helix 2
2
1
51 54Right-handed alpha
Helix 3
3
1
67 69Right-handed 310
Helix 4
4
1
71 75Right-handed alpha
Helix 5
5
1
103 111Right-handed alpha
Helix 6
6
1
159 162Right-handed 310
Helix 7
7
1
206 208Right-handed 310
Helix 8
8
1
213 215Right-handed 310
Helix 9
9
2
34 36Right-handed 310
Helix 10
10
2
57 59Right-handed 310
Helix 11
11
2
84 86Right-handed 310
Helix 12
12
2
90 98Right-handed alpha
Helix 13
13
2
140 143Right-handed alpha
Helix 14
14
2
146 148Right-handed 310
Helix 15
15
2
155 157Right-handed 310
Helix 16
16
2
165 169Right-handed 310
Helix 17
17
3
43 47Right-handed alpha
Helix 18
18
3
65 67Right-handed 310
Helix 19
19
3
93 96Right-handed 310
Helix 20
20
3
98 105Right-handed alpha
Helix 21
21
3
144 149Right-handed alpha
Helix 22
22
3
186 189Right-handed 310
Helix 23
23
4
36 38Right-handed 310
Helix 24
24
4
50 54Right-handed 310
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There are 10 sheets in PDB entry 1BEV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
92 96first strand
Strand 2
1
219 224anti-parallel
Strand 3
1
140 146anti-parallel
Strand 4
1
168 172anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
114 116first strand
Strand 2
1
244 246anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
178 182first strand
Strand 2
1
118 126anti-parallel
Strand 3
1
233 241anti-parallel
Strand 4
1
78 82anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
14 18first strand
Strand 2
2
21 25anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
63 65first strand
Strand 2
2
227 233anti-parallel
Strand 3
2
105 111anti-parallel
Strand 4
2
182 187anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
78 82first strand
Strand 2
2
204 212anti-parallel
Strand 3
2
121 128anti-parallel
Strand 4
2
172 176anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
101 103first strand
Strand 2
2
236 238anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
69 72first strand
Strand 2
3
211 220anti-parallel
Strand 3
3
113 119anti-parallel
Strand 4
3
162 167anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
108 110first strand
Strand 2
3
225 227anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
151 156first strand
Strand 2
3
128 134anti-parallel
Strand 3
3
193 198anti-parallel
Strand 4
3
80 85anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il