Analysis of interatomic Contacts of Structural Units in PDB entry:
1BGW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1BGW entry

There is 1 chain in PDB entry 1BGW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 420ARG 1178
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 1BGW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
441 443Right-handed 310
Helix 2
2
A
451 465Right-handed alpha
Helix 3
3
A
490 503Right-handed alpha
Helix 4
4
A
534 546Right-handed alpha
Helix 5
5
A
548 551Right-handed alpha
Helix 6
6
A
582 591Right-handed alpha
Helix 7
7
A
593 595Right-handed 310
Helix 8
8
A
611 628Right-handed alpha
Helix 9
9
A
685 692Right-handed alpha
Helix 10
10
A
702 713Right-handed alpha
Helix 11
11
A
722 733Right-handed alpha
Helix 12
12
A
739 750Right-handed alpha
Helix 13
13
A
771 773Right-handed 310
Helix 14
14
A
792 795Right-handed alpha
Helix 15
15
A
798 803Right-handed 310
Helix 16
16
A
825 829Right-handed alpha
Helix 17
17
A
847 859Right-handed alpha
Helix 18
18
A
910 921Right-handed alpha
Helix 19
19
A
950 959Right-handed alpha
Helix 20
20
A
961 964Right-handed alpha
Helix 21
21
A
991 1035Right-handed alpha
Helix 22
22
A
1046 1055Right-handed alpha
Helix 23
23
A
1115 1118Right-handed alpha
Helix 24
24
A
1122 1125Right-handed 310
Helix 25
25
A
1127 1148Right-handed alpha
Helix 26
26
A
1152 1176Right-handed alpha
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There are 6 sheets in PDB entry 1BGW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
470 475first strand
Strand 2
A
445 450parallel
Strand 3
A
521 526parallel
Strand 4
A
557 559parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
574 579first strand
Strand 2
A
565 570anti-parallel
Strand 3
A
598 602anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
831 834first strand
Strand 2
A
839 842anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
876 879first strand
Strand 2
A
884 888anti-parallel
Strand 3
A
968 972anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
933 936first strand
Strand 2
A
944 947anti-parallel
Strand 3
A
898 903anti-parallel
Strand 4
A
890 893anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
977 979first strand
Strand 2
A
985 987anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il