Analysis of interatomic Contacts of Structural Units in PDB entry:
1BGY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1BGY entry

There are 22 chains in PDB entry 1BGY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 1PHE 446
B
 PRO 21LEU 439
C
 MET 1TRP 379
D
 SER 1LYS 241
E
 SER 1GLU 75
F
 ALA 5LYS 110
G
 GLY 1ARG 81
H
 ASP 15LYS 78
I
 LYS 46TYR 78
J
 VAL 1LYS 62
K
 ARG 15THR 36
M
 THR 1PHE 446
N
 PRO 21LEU 439
O
 MET 1TRP 379
P
 SER 1LYS 241
Q
 SER 1GLY 196
R
 ALA 5LYS 110
S
 GLY 1ARG 81
T
 ASP 15LYS 78
U
 LYS 46TYR 78
V
 VAL 1LYS 62
W
 ARG 15THR 36
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are168 helices in PDB entry 1BGY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 10Right-handed alpha
Helix 2
2
A
51 62Right-handed 310
Helix 3
3
A
74 82Right-handed alpha
Helix 4
4
A
103 118Right-handed 310
Helix 5
5
A
124 143Right-handed alpha
Helix 6
6
A
145 157Right-handed alpha
Helix 7
7
A
162 164Right-handed 310
Helix 8
8
A
173 176Right-handed alpha
Helix 9
9
A
179 189Right-handed alpha
Helix 10
10
A
205 211Right-handed alpha
Helix 11
11
A
224 227Right-handed 310
Helix 12
12
A
265 277Right-handed 310
Helix 13
13
A
287 289Right-handed 310
Helix 14
14
A
293 300Right-handed alpha
Helix 15
15
A
331 348Right-handed alpha
Helix 16
16
A
351 369Right-handed alpha
Helix 17
17
A
372 385Right-handed alpha
Helix 18
18
A
392 401Right-handed alpha
Helix 19
19
A
404 414Right-handed alpha
Helix 20
20
A
434 441Right-handed alpha
Helix 21
21
B
55 57Right-handed 310
Helix 22
22
B
65 71Right-handed alpha
Helix 23
23
B
82 92Right-handed alpha
Helix 24
24
B
113 128Right-handed 310
Helix 25
25
B
134 153Right-handed alpha
Helix 26
26
B
155 167Right-handed alpha
Helix 27
27
B
180 185Right-handed 310
Helix 28
28
B
188 198Right-handed alpha
Helix 29
29
B
201 203Right-handed 310
Helix 30
30
B
213 223Right-handed alpha
Helix 31
31
B
267 279Right-handed alpha
Helix 32
32
B
294 302Right-handed alpha
Helix 33
33
B
333 349Right-handed alpha
Helix 34
34
B
354 372Right-handed 310
Helix 35
35
B
375 388Right-handed alpha
Helix 36
36
B
395 404Right-handed alpha
Helix 37
37
B
407 418Right-handed alpha
Helix 38
38
C
5 8Right-handed alpha
Helix 39
39
C
10 19Right-handed alpha
Helix 40
40
C
29 51Right-handed 310
Helix 41
41
C
59 69Right-handed alpha
Helix 42
42
C
76 104Right-handed alpha
Helix 43
43
C
106 108Right-handed 310
Helix 44
44
C
110 133Right-handed alpha
Helix 45
45
C
137 152Right-handed alpha
Helix 46
46
C
157 164Right-handed alpha
Helix 47
47
C
172 202Right-handed alpha
Helix 48
48
C
224 245Right-handed alpha
Helix 49
49
C
272 282Right-handed alpha
Helix 50
50
C
287 307Right-handed alpha
Helix 51
51
C
315 317Right-handed 310
Helix 52
52
C
319 340Right-handed alpha
Helix 53
53
C
345 363Right-handed alpha
Helix 54
54
C
365 376Right-handed alpha
Helix 55
55
D
23 36Right-handed alpha
Helix 56
56
D
58 71Right-handed alpha
Helix 57
57
D
73 77Right-handed alpha
Helix 58
58
D
98 105Right-handed alpha
Helix 59
59
D
113 119Right-handed 310
Helix 60
60
D
123 131Right-handed alpha
Helix 61
61
D
179 194Right-handed alpha
Helix 62
62
D
198 231Right-handed alpha
Helix 63
63
E
16 18Right-handed 310
Helix 64
64
E
29 63Right-handed alpha
Helix 65
65
E
66 71Right-handed alpha
Helix 66
66
F
13 23Right-handed alpha
Helix 67
67
F
25 27Right-handed 310
Helix 68
68
F
33 36Right-handed 310
Helix 69
69
F
41 49Right-handed alpha
Helix 70
70
F
52 71Right-handed alpha
Helix 71
71
F
77 79Right-handed 310
Helix 72
72
F
83 85Right-handed 310
Helix 73
73
F
89 108Right-handed alpha
Helix 74
74
G
20 22Right-handed 310
Helix 75
75
G
29 71Right-handed alpha
Helix 76
76
H
16 26Right-handed alpha
Helix 77
77
H
28 46Right-handed alpha
Helix 78
78
H
54 75Right-handed alpha
Helix 79
79
J
5 13Right-handed alpha
Helix 80
80
J
17 47Right-handed alpha
Helix 81
81
J
52 55Right-handed alpha
Helix 82
82
K
16 34Right-handed alpha
Helix 83
83
M
4 10Right-handed alpha
Helix 84
84
M
45 47Right-handed 310
Helix 85
85
M
51 61Right-handed 310
Helix 86
86
M
74 82Right-handed alpha
Helix 87
87
M
103 118Right-handed 310
Helix 88
88
M
124 143Right-handed alpha
Helix 89
89
M
145 157Right-handed alpha
Helix 90
90
M
162 164Right-handed 310
Helix 91
91
M
171 176Right-handed alpha
Helix 92
92
M
179 189Right-handed alpha
Helix 93
93
M
205 211Right-handed alpha
Helix 94
94
M
224 227Right-handed 310
Helix 95
95
M
265 277Right-handed 310
Helix 96
96
M
287 289Right-handed 310
Helix 97
97
M
293 301Right-handed alpha
Helix 98
98
M
331 348Right-handed alpha
Helix 99
99
M
351 369Right-handed alpha
Helix 100
100
M
372 385Right-handed alpha
Helix 101
101
M
392 400Right-handed alpha
Helix 102
102
M
404 414Right-handed alpha
Helix 103
103
M
434 441Right-handed alpha
Helix 104
104
N
55 57Right-handed 310
Helix 105
105
N
65 72Right-handed alpha
Helix 106
106
N
82 92Right-handed alpha
Helix 107
107
N
113 128Right-handed 310
Helix 108
108
N
134 153Right-handed alpha
Helix 109
109
N
155 167Right-handed alpha
Helix 110
110
N
183 185Right-handed 310
Helix 111
111
N
188 198Right-handed alpha
Helix 112
112
N
201 203Right-handed 310
Helix 113
113
N
213 223Right-handed alpha
Helix 114
114
N
267 279Right-handed alpha
Helix 115
115
N
294 302Right-handed alpha
Helix 116
116
N
330 349Right-handed 310
Helix 117
117
N
354 373Right-handed 310
Helix 118
118
N
375 388Right-handed alpha
Helix 119
119
N
395 404Right-handed alpha
Helix 120
120
N
407 418Right-handed alpha
Helix 121
121
N
430 432Right-handed 310
Helix 122
122
O
5 8Right-handed alpha
Helix 123
123
O
10 14Right-handed alpha
Helix 124
124
O
29 51Right-handed 310
Helix 125
125
O
59 69Right-handed alpha
Helix 126
126
O
76 104Right-handed alpha
Helix 127
127
O
106 108Right-handed 310
Helix 128
128
O
110 133Right-handed alpha
Helix 129
129
O
137 152Right-handed alpha
Helix 130
130
O
157 164Right-handed alpha
Helix 131
131
O
172 202Right-handed alpha
Helix 132
132
O
224 245Right-handed alpha
Helix 133
133
O
272 282Right-handed alpha
Helix 134
134
O
287 307Right-handed alpha
Helix 135
135
O
315 317Right-handed 310
Helix 136
136
O
319 340Right-handed alpha
Helix 137
137
O
345 363Right-handed alpha
Helix 138
138
O
365 376Right-handed alpha
Helix 139
139
P
23 36Right-handed alpha
Helix 140
140
P
58 71Right-handed alpha
Helix 141
141
P
73 77Right-handed alpha
Helix 142
142
P
98 105Right-handed alpha
Helix 143
143
P
113 119Right-handed 310
Helix 144
144
P
123 131Right-handed alpha
Helix 145
145
P
179 194Right-handed alpha
Helix 146
146
P
198 231Right-handed alpha
Helix 147
147
Q
16 18Right-handed 310
Helix 148
148
Q
29 63Right-handed alpha
Helix 149
149
Q
66 71Right-handed alpha
Helix 150
150
Q
103 110Right-handed alpha
Helix 151
151
Q
114 116Right-handed 310
Helix 152
152
Q
123 125Right-handed 310
Helix 153
153
R
13 23Right-handed alpha
Helix 154
154
R
25 27Right-handed 310
Helix 155
155
R
33 36Right-handed 310
Helix 156
156
R
41 49Right-handed alpha
Helix 157
157
R
52 71Right-handed alpha
Helix 158
158
R
77 79Right-handed 310
Helix 159
159
R
89 108Right-handed alpha
Helix 160
160
S
20 22Right-handed 310
Helix 161
161
S
29 71Right-handed alpha
Helix 162
162
T
16 26Right-handed alpha
Helix 163
163
T
28 46Right-handed alpha
Helix 164
164
T
55 74Right-handed alpha
Helix 165
165
V
5 13Right-handed alpha
Helix 166
166
V
17 47Right-handed alpha
Helix 167
167
V
52 55Right-handed alpha
Helix 168
168
W
16 34Right-handed alpha
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There are 18 sheets in PDB entry 1BGY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 201first strand
Strand 2
A
34 41anti-parallel
Strand 3
A
95 102anti-parallel
Strand 4
A
85 90anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 242first strand
Strand 2
A
421 424parallel
Strand 3
A
251 258anti-parallel
Strand 4
A
318 326anti-parallel
Strand 5
A
310 313anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 281first strand
Strand 2
A
306 308anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 51first strand
Strand 2
B
105 112anti-parallel
Strand 3
B
95 100anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
243 247first strand
Strand 2
B
424 428parallel
Strand 3
B
253 261anti-parallel
Strand 4
B
319 328anti-parallel
Strand 5
B
308 316anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
22 24first strand
Strand 2
C
217 219anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
67 69first strand
Strand 2
I
74 76anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
24 29first strand
Strand 2
M
196 201parallel
Strand 3
M
34 39anti-parallel
Strand 4
M
95 102anti-parallel
Strand 5
M
85 90anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
240 243first strand
Strand 2
M
421 425parallel
Strand 3
M
252 258anti-parallel
Strand 4
M
318 325anti-parallel
Strand 5
M
310 313anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
279 281first strand
Strand 2
M
306 308anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
34 37first strand
Strand 2
N
205 208parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
44 51first strand
Strand 2
N
105 112anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
243 247first strand
Strand 2
N
424 428parallel
Strand 3
N
252 259anti-parallel
Strand 4
N
320 329anti-parallel
Strand 5
N
308 315anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
22 24first strand
Strand 2
O
217 219anti-parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
87 91first strand
Strand 2
Q
94 100anti-parallel
Strand 3
Q
132 136anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
156 158first strand
Strand 2
Q
163 165anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
185 187first strand
Strand 2
Q
193 195anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
67 69first strand
Strand 2
U
74 76anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il