Analysis of interatomic Contacts of Structural Units in PDB entry:
1BHM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1BHM entry

There are 4 chains in PDB entry 1BHM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 T 1 A 12
D
 T 1 T 11
A
 MET 1MET 198
B
 MET 1ASP 208
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1BHM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AH1
A
10 16Right-handed alpha
Helix 2
AH2
A
20 34Right-handed alpha
Helix 3
AH3
A
58 70Right-handed alpha
Helix 4
A3A
A
8 84Right-handed alpha
Helix 5
AH4
A
117 132Right-handed alpha
Helix 6
AH5
A
146 149Right-handed alpha
Helix 7
AH6
A
159 169Right-handed alpha
Helix 8
BH1
B
10 16Right-handed alpha
Helix 9
BH2
B
20 34Right-handed alpha
Helix 10
BH3
B
58 70Right-handed alpha
Helix 11
B3A
B
8 84Right-handed alpha
Helix 12
BH4
B
117 132Right-handed alpha
Helix 13
BH5
B
146 149Right-handed alpha
Helix 14
BH6
B
159 169Right-handed alpha
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There are 4 sheets in PDB entry 1BHM. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
95 101anti-parallel
Strand 3
A
104 112anti-parallel
Strand 4
A
137 144parallel
Strand 5
A
174 180parallel
Strand 6
A
2 8anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
A
183 185parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 76first strand
Strand 2
B
95 101anti-parallel
Strand 3
B
104 112anti-parallel
Strand 4
B
137 144parallel
Strand 5
B
174 180parallel
Strand 6
B
2 8anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 48first strand
Strand 2
B
183 185parallel
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