Analysis of interatomic Contacts of Structural Units in PDB entry:
1BHY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1BHY entry

There is 1 chain in PDB entry 1BHY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 117LYS 598
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1BHY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
132 143Right-handed alpha
Helix 2
2
A
159 164Right-handed alpha
Helix 3
3
A
166 186Right-handed alpha
Helix 4
4
A
199 223Right-handed alpha
Helix 5
5
A
291 296Right-handed alpha
Helix 6
6
A
311 323Right-handed alpha
Helix 7
7
A
342 355Right-handed alpha
Helix 8
8
A
404 406Right-handed 310
Helix 9
9
A
409 411Right-handed 310
Helix 10
10
A
439 441Right-handed 310
Helix 11
11
A
448 463Right-handed alpha
Helix 12
12
A
491 497Right-handed alpha
Helix 13
13
A
508 510Right-handed 310
Helix 14
14
A
512 516Right-handed alpha
Helix 15
15
A
545 557Right-handed alpha
Helix 16
16
A
562 566Right-handed alpha
Helix 17
17
A
576 587Right-handed 310
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There are 8 sheets in PDB entry 1BHY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 123first strand
Strand 2
A
260 265parallel
Strand 3
A
240 245anti-parallel
Strand 4
A
231 237anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
435 437first strand
Strand 2
A
267 270parallel
Strand 3
A
125 128parallel
Strand 4
A
148 152parallel
Strand 5
A
227 230parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 276first strand
Strand 2
A
400 402anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 307first strand
Strand 2
A
394 396parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 391first strand
Strand 2
A
374 380anti-parallel
Strand 3
A
364 371anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
476 478first strand
Strand 2
A
484 488anti-parallel
Strand 3
A
535 541anti-parallel
Strand 4
A
523 529anti-parallel
Strand 5
A
501 507anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 250first strand
Strand 2
A
253 256anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 330first strand
Strand 2
A
356 360parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il