Analysis of interatomic Contacts of Structural Units in PDB entry:
1BQ7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1BQ7 entry

There are 6 chains in PDB entry 1BQ7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 2GLU 187
B
 GLN 2GLU 187
C
 GLN 2GLU 187
D
 GLN 2GLU 187
E
 GLN 2GLU 187
F
 GLN 2GLU 187
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 1BQ7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 38Right-handed alpha
Helix 2
2
A
42 47Right-handed alpha
Helix 3
3
A
66 82Right-handed alpha
Helix 4
4
A
85 97Right-handed alpha
Helix 5
5
A
105 115Right-handed alpha
Helix 6
6
A
119 127Right-handed alpha
Helix 7
7
A
129 144Right-handed alpha
Helix 8
8
A
163 165Right-handed 310
Helix 9
9
A
171 185Right-handed alpha
Helix 10
10
B
31 38Right-handed alpha
Helix 11
11
B
42 49Right-handed alpha
Helix 12
12
B
66 82Right-handed alpha
Helix 13
13
B
85 96Right-handed alpha
Helix 14
14
B
105 115Right-handed alpha
Helix 15
15
B
119 127Right-handed alpha
Helix 16
16
B
129 144Right-handed alpha
Helix 17
17
B
163 165Right-handed 310
Helix 18
18
B
171 185Right-handed alpha
Helix 19
19
C
31 38Right-handed alpha
Helix 20
20
C
42 48Right-handed alpha
Helix 21
21
C
67 81Right-handed alpha
Helix 22
22
C
85 96Right-handed alpha
Helix 23
23
C
105 115Right-handed alpha
Helix 24
24
C
119 127Right-handed alpha
Helix 25
25
C
129 144Right-handed alpha
Helix 26
26
C
163 165Right-handed 310
Helix 27
27
C
171 185Right-handed alpha
Helix 28
28
D
31 38Right-handed alpha
Helix 29
29
D
42 49Right-handed alpha
Helix 30
30
D
67 82Right-handed alpha
Helix 31
31
D
85 97Right-handed alpha
Helix 32
32
D
105 114Right-handed alpha
Helix 33
33
D
119 127Right-handed alpha
Helix 34
34
D
129 144Right-handed alpha
Helix 35
35
D
163 165Right-handed 310
Helix 36
36
D
171 185Right-handed alpha
Helix 37
37
E
31 38Right-handed alpha
Helix 38
38
E
42 49Right-handed alpha
Helix 39
39
E
66 82Right-handed alpha
Helix 40
40
E
85 97Right-handed alpha
Helix 41
41
E
105 114Right-handed alpha
Helix 42
42
E
119 127Right-handed alpha
Helix 43
43
E
129 144Right-handed alpha
Helix 44
44
E
163 165Right-handed 310
Helix 45
45
E
171 185Right-handed alpha
Helix 46
46
F
31 37Right-handed alpha
Helix 47
47
F
42 48Right-handed alpha
Helix 48
48
F
66 82Right-handed alpha
Helix 49
49
F
85 97Right-handed alpha
Helix 50
50
F
105 114Right-handed alpha
Helix 51
51
F
119 127Right-handed alpha
Helix 52
52
F
129 144Right-handed alpha
Helix 53
53
F
163 165Right-handed 310
Helix 54
54
F
171 185Right-handed alpha
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There are 12 sheets in PDB entry 1BQ7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 11first strand
Strand 2
A
159 161anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 60first strand
Strand 2
A
22 26parallel
Strand 3
A
152 155anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 11first strand
Strand 2
B
159 161anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 60first strand
Strand 2
B
22 26parallel
Strand 3
B
152 155anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 11first strand
Strand 2
C
159 161anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
56 60first strand
Strand 2
C
22 26parallel
Strand 3
C
152 155anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
9 11first strand
Strand 2
D
159 161anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
56 60first strand
Strand 2
D
22 26parallel
Strand 3
D
152 155anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
9 11first strand
Strand 2
E
159 161anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
56 60first strand
Strand 2
E
22 26parallel
Strand 3
E
152 155anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
9 11first strand
Strand 2
F
159 161anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
56 60first strand
Strand 2
F
22 26parallel
Strand 3
F
152 155anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il