Analysis of interatomic Contacts of Structural Units in PDB entry:
1BR6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1BR6 entry

There is 1 chain in PDB entry 1BR6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 0PHE 267
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1BR6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
17 33Right-handed alpha
Helix 2
2
A
52 55Right-handed 310
Helix 3
3
A
97 105Right-handed alpha
Helix 4
4
A
122 131Right-handed alpha
Helix 5
5
A
133 137Right-handed 310
Helix 6
6
A
140 155Right-handed alpha
Helix 7
7
A
160 176Right-handed alpha
Helix 8
8
A
175 181Right-handed alpha
Helix 9
9
A
181 194Right-handed alpha
Helix 10
10
A
201 221Right-handed alpha
Helix 11
11
A
246 249Right-handed 310
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There are 2 sheets in PDB entry 1BR6. Click on sheet of interest to get list of strands forming it: 1, 2,

There are 6 strands in 1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
7 13first strand
Strand 2
A
59 64parallel
Strand 3
A
68 73anti-parallel
Strand 4
A
82 86anti-parallel
Strand 5
A
89 93anti-parallel
Strand 6
A
115 117parallel
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There are 2 strands in 2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
230 234first strand
Strand 2
A
237 242anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il