Analysis of interatomic Contacts of Structural Units in PDB entry:
1BSV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1BSV entry

There is 1 chain in PDB entry 1BSV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3PHE 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1BSV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 24Right-handed alpha
Helix 2
2
A
44 53Right-handed alpha
Helix 3
3
A
69 74Right-handed alpha
Helix 4
4
A
76 97Right-handed alpha
Helix 5
5
A
108 110Right-handed 310
Helix 6
6
A
121 123Right-handed 310
Helix 7
7
A
131 154Right-handed 310
Helix 8
8
A
180 193Right-handed alpha
Helix 9
9
A
214 226Right-handed alpha
Helix 10
10
A
229 235Right-handed alpha
Helix 11
11
A
253 264Right-handed alpha
Helix 12
12
A
288 292Right-handed alpha
Helix 13
13
A
301 314Right-handed alpha
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There are 3 sheets in PDB entry 1BSV. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 32first strand
Strand 2
A
4 9parallel
Strand 3
A
58 61parallel
Strand 4
A
101 105parallel
Strand 5
A
157 163parallel
Strand 6
A
243 245parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 167first strand
Strand 2
A
211 213parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 202first strand
Strand 2
A
269 273parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il