Analysis of interatomic Contacts of Structural Units in PDB entry:
1BUG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1BUG entry

There are 2 chains in PDB entry 1BUG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1LEU 341
B
 ALA 1LEU 341
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 1BUG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 10Right-handed 310
Helix 2
2
A
52 54Right-handed 310
Helix 3
3
A
57 72Right-handed alpha
Helix 4
4
A
83 92Right-handed alpha
Helix 5
5
A
114 133Right-handed alpha
Helix 6
6
A
155 157Right-handed 310
Helix 7
7
A
192 207Right-handed alpha
Helix 8
8
A
209 211Right-handed 310
Helix 9
9
A
214 218Right-handed alpha
Helix 10
10
A
234 238Right-handed alpha
Helix 11
11
A
240 247Right-handed alpha
Helix 12
12
A
264 266Right-handed 310
Helix 13
13
A
268 286Right-handed 310
Helix 14
14
A
299 302Right-handed alpha
Helix 15
15
A
320 324Right-handed 310
Helix 16
16
B
8 10Right-handed 310
Helix 17
17
B
52 54Right-handed 310
Helix 18
18
B
57 72Right-handed alpha
Helix 19
19
B
83 92Right-handed alpha
Helix 20
20
B
114 133Right-handed alpha
Helix 21
21
B
155 158Right-handed 310
Helix 22
22
B
192 207Right-handed alpha
Helix 23
23
B
214 218Right-handed alpha
Helix 24
24
B
234 238Right-handed alpha
Helix 25
25
B
240 247Right-handed alpha
Helix 26
26
B
264 266Right-handed 310
Helix 27
27
B
268 286Right-handed 310
Helix 28
28
B
299 302Right-handed alpha
Helix 29
29
B
320 322Right-handed 310
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There are 2 sheets in PDB entry 1BUG. Click on sheet of interest to get list of strands forming it: A, B,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 37first strand
Strand 2
A
315 319parallel
Strand 3
A
305 309anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 37first strand
Strand 2
B
315 319parallel
Strand 3
B
305 309anti-parallel
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