Analysis of interatomic Contacts of Structural Units in PDB entry:
1BVW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1BVW entry

There is 1 chain in PDB entry 1BVW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 91PHE 450
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 1BVW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
103 111Right-handed alpha
Helix 2
2
A
114 116Right-handed 310
Helix 3
3
A
120 131Right-handed alpha
Helix 4
4
A
141 143Right-handed 310
Helix 5
5
A
147 160Right-handed alpha
Helix 6
6
A
192 194Right-handed 310
Helix 7
7
A
196 214Right-handed alpha
Helix 8
8
A
228 233Right-handed 310
Helix 9
9
A
238 257Right-handed alpha
Helix 10
10
A
278 294Right-handed alpha
Helix 11
11
A
321 323Right-handed 310
Helix 12
12
A
331 345Right-handed alpha
Helix 13
13
A
417 420Right-handed 310
Helix 14
14
A
436 444Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 1BVW.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 138first strand
Strand 2
A
169 173parallel
Strand 3
A
219 223parallel
Strand 4
A
263 268parallel
Strand 5
A
301 306parallel
Strand 6
A
350 354parallel
Strand 7
A
392 396parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il