Analysis of interatomic Contacts of Structural Units in PDB entry:
1BWM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1BWM entry

There is 1 chain in PDB entry 1BWM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3TYR 417
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 1BWM

There are 4 sheets in PDB entry 1BWM. Click on sheet of interest to get list of strands forming it: B1, B2, A1, A2,

There are 4 strands in B1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 6first strand
Strand 2
A
21 24anti-parallel
Strand 3
A
75 79anti-parallel
Strand 4
A
67 69anti-parallel
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There are 5 strands in B2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 13first strand
Strand 2
A
112 115parallel
Strand 3
A
90 95anti-parallel
Strand 4
A
32 36anti-parallel
Strand 5
A
44 48anti-parallel
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There are 5 strands in A1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 306first strand
Strand 2
A
318 323anti-parallel
Strand 3
A
373 377anti-parallel
Strand 4
A
362 365anti-parallel
Strand 5
A
356 358anti-parallel
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There are 5 strands in A2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
310 312first strand
Strand 2
A
410 413parallel
Strand 3
A
386 391anti-parallel
Strand 4
A
332 336anti-parallel
Strand 5
A
344 348anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il