Analysis of interatomic Contacts of Structural Units in PDB entry:
1BXC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1BXC entry

There are 4 chains in PDB entry 1BXC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1GLY 387
B
MET 1GLY 387
C
MET 1GLY 387
D
MET 1GLY 387
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 84 helices in PDB entry 1BXC. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
6 8Right-handed 310
Helix 2
2
A
14 17Right-handed alpha
Helix 3
3
A
35 45Right-handed alpha
Helix 4
4
A
54 57Right-handed alpha
Helix 5
5
A
64 81Right-handed alpha
Helix 6
6
A
96 98Right-handed 310
Helix 7
7
A
108 128Right-handed alpha
Helix 8
8
A
145 147Right-handed 310
Helix 9
9
A
149 151Right-handed 310
Helix 10
10
A
153 171Right-handed alpha
Helix 11
11
A
195 204Right-handed alpha
Helix 12
12
A
208 210Right-handed 310
Helix 13
13
A
217 223Right-handed alpha
Helix 14
14
A
227 237Right-handed alpha
Helix 15
15
A
264 277Right-handed alpha
Helix 16
16
A
295 321Right-handed alpha
Helix 17
17
A
323 333Right-handed alpha
Helix 18
18
A
337 342Right-handed alpha
Helix 19
19
A
348 356Right-handed alpha
Helix 20
20
A
361 365Right-handed alpha
Helix 21
21
A
371 382Right-handed alpha
Helix 22
22
B
6 8Right-handed 310
Helix 23
23
B
14 17Right-handed alpha
Helix 24
24
B
35 45Right-handed alpha
Helix 25
25
B
54 57Right-handed alpha
Helix 26
26
B
64 81Right-handed alpha
Helix 27
27
B
96 98Right-handed 310
Helix 28
28
B
108 128Right-handed alpha
Helix 29
29
B
145 147Right-handed 310
Helix 30
30
B
149 151Right-handed 310
Helix 31
31
B
153 171Right-handed alpha
Helix 32
32
B
195 204Right-handed alpha
Helix 33
33
B
208 210Right-handed 310
Helix 34
34
B
217 223Right-handed alpha
Helix 35
35
B
227 236Right-handed alpha
Helix 36
36
B
264 277Right-handed alpha
Helix 37
37
B
295 321Right-handed alpha
Helix 38
38
B
323 333Right-handed alpha
Helix 39
39
B
337 340Right-handed alpha
Helix 40
40
B
348 356Right-handed alpha
Helix 41
41
B
361 365Right-handed alpha
Helix 42
42
B
371 382Right-handed alpha
Helix 43
43
C
6 8Right-handed 310
Helix 44
44
C
14 17Right-handed alpha
Helix 45
45
C
35 45Right-handed alpha
Helix 46
46
C
54 57Right-handed alpha
Helix 47
47
C
64 81Right-handed alpha
Helix 48
48
C
96 98Right-handed 310
Helix 49
49
C
108 128Right-handed alpha
Helix 50
50
C
145 147Right-handed 310
Helix 51
51
C
149 151Right-handed 310
Helix 52
52
C
153 171Right-handed alpha
Helix 53
53
C
195 204Right-handed alpha
Helix 54
54
C
208 210Right-handed 310
Helix 55
55
C
217 223Right-handed alpha
Helix 56
56
C
227 236Right-handed alpha
Helix 57
57
C
264 277Right-handed alpha
Helix 58
58
C
295 321Right-handed alpha
Helix 59
59
C
323 333Right-handed alpha
Helix 60
60
C
337 342Right-handed alpha
Helix 61
61
C
348 356Right-handed alpha
Helix 62
62
C
361 365Right-handed alpha
Helix 63
63
C
371 382Right-handed alpha
Helix 64
64
D
6 8Right-handed 310
Helix 65
65
D
14 17Right-handed alpha
Helix 66
66
D
35 45Right-handed alpha
Helix 67
67
D
54 57Right-handed alpha
Helix 68
68
D
64 81Right-handed alpha
Helix 69
69
D
96 98Right-handed 310
Helix 70
70
D
108 128Right-handed alpha
Helix 71
71
D
145 147Right-handed 310
Helix 72
72
D
149 151Right-handed 310
Helix 73
73
D
153 171Right-handed alpha
Helix 74
74
D
195 204Right-handed alpha
Helix 75
75
D
208 210Right-handed 310
Helix 76
76
D
217 223Right-handed alpha
Helix 77
77
D
227 236Right-handed alpha
Helix 78
78
D
264 277Right-handed alpha
Helix 79
79
D
295 321Right-handed alpha
Helix 80
80
D
323 333Right-handed alpha
Helix 81
81
D
337 340Right-handed alpha
Helix 82
82
D
348 356Right-handed alpha
Helix 83
83
D
361 365Right-handed alpha
Helix 84
84
D
371 382Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 1BXC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
11 13first strand
Strand 2
A
49 51parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
132 136first strand
Strand 2
A
176 180parallel
Strand 3
A
211 216parallel
Strand 4
A
240 245parallel
Strand 5
A
283 285parallel
Back to list of sheets
Back to top of page

There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
49 51first strand
Strand 2
B
10 13parallel
Strand 3
B
283 285parallel
Strand 4
B
240 245parallel
Strand 5
B
211 216parallel
Strand 6
B
176 180parallel
Strand 7
B
132 136parallel
Back to list of sheets
Back to top of page

There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
49 51first strand
Strand 2
C
10 13parallel
Strand 3
C
283 285parallel
Strand 4
C
240 245parallel
Strand 5
C
211 216parallel
Strand 6
C
176 180parallel
Strand 7
C
132 136parallel
Back to list of sheets
Back to top of page

There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
49 51first strand
Strand 2
D
10 13parallel
Strand 3
D
283 285parallel
Strand 4
D
240 245parallel
Strand 5
D
211 216parallel
Strand 6
D
176 180parallel
Strand 7
D
132 136parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il