Analysis of interatomic Contacts of Structural Units in PDB entry:
1BYR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1BYR entry

There is 1 chain in PDB entry 1BYR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2SER 153
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 1BYR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 25Right-handed alpha
Helix 2
2
A
40 51Right-handed alpha
Helix 3
3
A
68 80Right-handed alpha
Helix 4
4
A
114 118Right-handed alpha
Helix 5
5
A
131 147Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1BYR.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 10first strand
Strand 2
A
122 128anti-parallel
Strand 3
A
104 108anti-parallel
Strand 4
A
97 100anti-parallel
Strand 5
A
29 34anti-parallel
Strand 6
A
55 61parallel
Strand 7
A
83 87parallel
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