Analysis of interatomic Contacts of Structural Units in PDB entry:
1C5G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1C5G entry

There is 1 chain in PDB entry 1C5G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 24PRO 402
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1C5G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
26 49Right-handed alpha
Helix 2
2
A
58 69Right-handed alpha
Helix 3
3
A
74 86Right-handed alpha
Helix 4
4
A
93 106Right-handed alpha
Helix 5
5
A
107 111Right-handed 310
Helix 6
6
A
131 141Right-handed alpha
Helix 7
7
A
151 167Right-handed alpha
Helix 8
8
A
176 180Right-handed 310
Helix 9
9
A
270 275Right-handed alpha
Helix 10
10
A
278 287Right-handed alpha
Helix 11
11
A
309 317Right-handed alpha
Helix 12
12
A
319 323Right-handed 310
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There are 3 sheets in PDB entry 1C5G. Click on sheet of interest to get list of strands forming it: A, A1, B,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 299first strand
Strand 2
A
221 238anti-parallel
Strand 3
A
208 211anti-parallel
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There are 7 strands in A1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 299first strand
Strand 2
A
221 238anti-parallel
Strand 3
A
242 250anti-parallel
Strand 4
A
256 263anti-parallel
Strand 5
A
380 387anti-parallel
Strand 6
A
392 400anti-parallel
Strand 7
A
56 57anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 147first strand
Strand 2
A
113 123parallel
Strand 3
A
186 197anti-parallel
Strand 4
A
355 366anti-parallel
Strand 5
A
340 351anti-parallel
Strand 6
A
301 308anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il