Analysis of interatomic Contacts of Structural Units in PDB entry:
1C7D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1C7D entry

There are 3 chains in PDB entry 1C7D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 284
B
 MET 1HIS 146
D
 MET 1HIS 146
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 1C7D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 18Right-handed alpha
Helix 2
2
A
20 36Right-handed alpha
Helix 3
3
A
37 43Right-handed 310
Helix 4
4
A
52 72Right-handed alpha
Helix 5
5
A
75 80Right-handed alpha
Helix 6
6
A
80 90Right-handed alpha
Helix 7
7
A
95 113Right-handed alpha
Helix 8
8
A
118 137Right-handed alpha
Helix 9
9
A
146 161Right-handed alpha
Helix 10
10
A
163 179Right-handed alpha
Helix 11
11
A
180 186Right-handed 310
Helix 12
12
A
195 215Right-handed alpha
Helix 13
13
A
218 223Right-handed alpha
Helix 14
14
A
223 233Right-handed alpha
Helix 15
15
A
238 256Right-handed alpha
Helix 16
16
A
261 280Right-handed alpha
Helix 17
17
B
4 16Right-handed alpha
Helix 18
18
B
19 35Right-handed alpha
Helix 19
19
B
36 42Right-handed 310
Helix 20
20
B
42 46Right-handed 310
Helix 21
21
B
50 56Right-handed alpha
Helix 22
22
B
57 75Right-handed alpha
Helix 23
23
B
76 79Right-handed 310
Helix 24
24
B
80 95Right-handed alpha
Helix 25
25
B
100 119Right-handed alpha
Helix 26
26
B
120 122Right-handed 310
Helix 27
27
B
123 143Right-handed alpha
Helix 28
28
D
4 16Right-handed alpha
Helix 29
29
D
19 35Right-handed alpha
Helix 30
30
D
36 42Right-handed 310
Helix 31
31
D
42 46Right-handed 310
Helix 32
32
D
50 57Right-handed alpha
Helix 33
33
D
57 76Right-handed alpha
Helix 34
34
D
77 79Right-handed 310
Helix 35
35
D
80 95Right-handed alpha
Helix 36
36
D
100 119Right-handed alpha
Helix 37
37
D
120 122Right-handed 310
Helix 38
38
D
123 143Right-handed alpha
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There are no sheets in PDB entry 1C7D
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