Analysis of interatomic Contacts of Structural Units in PDB entry:
1C7Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1C7Q entry

There is 1 chain in PDB entry 1C7Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2LEU 443
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 1C7Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 11Right-handed 310
Helix 2
2
A
15 21Right-handed alpha
Helix 3
3
A
22 36Right-handed alpha
Helix 4
4
A
40 44Right-handed 310
Helix 5
5
A
48 53Right-handed alpha
Helix 6
6
A
54 72Right-handed alpha
Helix 7
7
A
80 83Right-handed 310
Helix 8
8
A
84 95Right-handed alpha
Helix 9
9
A
98 102Right-handed 310
Helix 10
10
A
116 128Right-handed alpha
Helix 11
11
A
143 162Right-handed alpha
Helix 12
12
A
162 167Right-handed alpha
Helix 13
13
A
179 189Right-handed alpha
Helix 14
14
A
210 217Right-handed alpha
Helix 15
15
A
220 235Right-handed alpha
Helix 16
16
A
243 258Right-handed alpha
Helix 17
17
A
269 271Right-handed 310
Helix 18
18
A
272 288Right-handed alpha
Helix 19
19
A
302 306Right-handed 310
Helix 20
20
A
308 315Right-handed alpha
Helix 21
21
A
345 349Right-handed 310
Helix 22
22
A
352 371Right-handed alpha
Helix 23
23
A
384 407Right-handed alpha
Helix 24
24
A
415 428Right-handed alpha
Helix 25
25
A
432 443Right-handed alpha
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There are 2 sheets in PDB entry 1C7Q. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 6first strand
Strand 2
A
375 382anti-parallel
Strand 3
A
319 328parallel
Strand 4
A
262 267parallel
Strand 5
A
295 300parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 111first strand
Strand 2
A
74 78parallel
Strand 3
A
132 137parallel
Strand 4
A
170 174parallel
Strand 5
A
191 194parallel
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