Analysis of interatomic Contacts of Structural Units in PDB entry:
1CBF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1CBF entry

There is 1 chain in PDB entry 1CBF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 13PRO 251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1CBF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
33 35Right-handed 310
Helix 2
2
A
38 46Right-handed alpha
Helix 3
3
A
59 64Right-handed alpha
Helix 4
4
A
79 92Right-handed alpha
Helix 5
5
A
111 120Right-handed alpha
Helix 6
6
A
132 139Right-handed alpha
Helix 7
7
A
166 168Right-handed 310
Helix 8
8
A
170 176Right-handed alpha
Helix 9
9
A
189 198Right-handed alpha
Helix 10
10
A
225 234Right-handed 310
Helix 11
11
A
247 249Right-handed 310
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There are 2 sheets in PDB entry 1CBF. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 127first strand
Strand 2
A
22 27parallel
Strand 3
A
96 100parallel
Strand 4
A
49 52parallel
Strand 5
A
70 73parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 157first strand
Strand 2
A
179 183parallel
Strand 3
A
241 245anti-parallel
Strand 4
A
206 211anti-parallel
Strand 5
A
219 224anti-parallel
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