Analysis of interatomic Contacts of Structural Units in PDB entry:
1CBG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1CBG entry

There is 1 chain in PDB entry 1CBG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 1LYS 490
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1CBG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
47 55Right-handed alpha
Helix 2
2
A
71 84Right-handed alpha
Helix 3
3
A
110 127Right-handed alpha
Helix 4
4
A
142 149Right-handed alpha
Helix 5
5
A
155 172Right-handed alpha
Helix 6
6
A
184 193Right-handed alpha
Helix 7
7
A
215 246Right-handed alpha
Helix 8
8
A
265 289Right-handed alpha
Helix 9
9
A
292 300Right-handed alpha
Helix 10
10
A
308 315Right-handed alpha
Helix 11
11
A
376 389Right-handed alpha
Helix 12
12
A
409 414Right-handed alpha
Helix 13
13
A
417 438Right-handed alpha
Helix 14
14
A
480 489Right-handed alpha
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There are 3 sheets in PDB entry 1CBG. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 134first strand
Strand 2
A
89 93parallel
Strand 3
A
24 28parallel
Strand 4
A
440 445parallel
Strand 5
A
393 397parallel
Strand 6
A
320 324parallel
Strand 7
A
248 254parallel
Strand 8
A
177 179parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
328 333first strand
Strand 2
A
350 353anti-parallel
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There are 1 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
474 477first strand
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il