Analysis of interatomic Contacts of Structural Units in PDB entry:
1CC9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1CC9 entry

There is 1 chain in PDB entry 1CC9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 18GLN 483
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 1CC9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 32Right-handed alpha
Helix 2
2
A
34 38Right-handed alpha
Helix 3
3
A
56 59Right-handed alpha
Helix 4
4
A
76 84Right-handed alpha
Helix 5
5
A
109 115Right-handed alpha
Helix 6
6
A
130 143Right-handed alpha
Helix 7
7
A
161 163Right-handed 310
Helix 8
8
A
206 216Right-handed alpha
Helix 9
9
A
291 307Right-handed alpha
Helix 10
10
A
311 314Right-handed alpha
Helix 11
11
A
359 366Right-handed alpha
Helix 12
12
A
392 396Right-handed 310
Helix 13
13
A
422 428Right-handed alpha
Helix 14
14
A
440 448Right-handed alpha
Helix 15
15
A
470 479Right-handed alpha
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There are 2 sheets in PDB entry 1CC9. Click on sheet of interest to get list of strands forming it: A, B,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 24first strand
Strand 2
A
88 90parallel
Strand 3
A
104 106parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 174first strand
Strand 2
A
122 125parallel
Strand 3
A
189 192parallel
Strand 4
A
223 227parallel
Strand 5
A
243 246parallel
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