Analysis of interatomic Contacts of Structural Units in PDB entry:
1CCI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1CCI entry

There is 1 chain in PDB entry 1CCI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 4LEU 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1CCI. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
A
A
15 33Right-handed alpha
Helix 2
B
A
42 54Right-handed alpha
Helix 3
B1
A
73 78Right-handed alpha
Helix 4
C
A
84 99Right-handed alpha
Helix 5
D
A
103 119Right-handed alpha
Helix 6
E
A
150 158Right-handed alpha
Helix 7
F
A
164 177Right-handed alpha
Helix 8
F1
A
181 186Right-handed alpha
Helix 9
G
A
201 209Right-handed alpha
Helix 10
H
A
232 240Right-handed alpha
Helix 11
I
A
241 253Right-handed alpha
Helix 12
J
A
255 272Right-handed alpha
Helix 13
J1
A
288 293Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1CCI.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
211 215first strand
Strand 2
A
221 225anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il