Analysis of interatomic Contacts of Structural Units in PDB entry:
1CF3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1CF3 entry

There is 1 chain in PDB entry 1CF3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 3GLN 583
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 1CF3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 7Right-handed alpha
Helix 2
2
A
12 14Right-handed 310
Helix 3
3
A
29 40Right-handed alpha
Helix 4
4
A
60 63Right-handed alpha
Helix 5
5
A
65 67Right-handed 310
Helix 6
6
A
102 105Right-handed 310
Helix 7
7
A
116 124Right-handed alpha
Helix 8
8
A
133 143Right-handed alpha
Helix 9
9
A
151 156Right-handed alpha
Helix 10
10
A
162 164Right-handed 310
Helix 11
11
A
185 196Right-handed alpha
Helix 12
12
A
228 232Right-handed alpha
Helix 13
13
A
234 236Right-handed 310
Helix 14
14
A
294 300Right-handed alpha
Helix 15
15
A
306 312Right-handed alpha
Helix 16
16
A
340 342Right-handed 310
Helix 17
17
A
354 371Right-handed alpha
Helix 18
18
A
373 382Right-handed alpha
Helix 19
19
A
389 404Right-handed alpha
Helix 20
20
A
443 445Right-handed 310
Helix 21
21
A
458 476Right-handed alpha
Helix 22
22
A
478 482Right-handed 310
Helix 23
23
A
491 493Right-handed 310
Helix 24
24
A
500 509Right-handed alpha
Helix 25
25
A
526 528Right-handed 310
Helix 26
26
A
561 581Right-handed alpha
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There are 5 sheets in PDB entry 1CF3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
544 546first strand
Strand 2
A
284 287parallel
Strand 3
A
22 25parallel
Strand 4
A
46 50parallel
Strand 5
A
242 246parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 146first strand
Strand 2
A
171 173parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 213first strand
Strand 2
A
347 353anti-parallel
Strand 3
A
409 416anti-parallel
Strand 4
A
420 427anti-parallel
Strand 5
A
331 337anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
435 438first strand
Strand 2
A
448 451anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 254first strand
Strand 2
A
266 272anti-parallel
Strand 3
A
275 280anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il