Analysis of interatomic Contacts of Structural Units in PDB entry:
1CFB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1CFB entry

There is 1 chain in PDB entry 1CFB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 610ARG 814
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 1CFB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
H1
A
697 705Polyproline
Helix 2
H2
A
739 742Right-handed 310
Helix 3
H3
A
801 804Polyproline
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There are 4 sheets in PDB entry 1CFB. Click on sheet of interest to get list of strands forming it: 1A, 1B, 2A, 2B,

There are 3 strands in 1A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
619 626first strand
Strand 2
A
629 635anti-parallel
Strand 3
A
673 678anti-parallel
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There are 4 strands in 1B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
660 667first strand
Strand 2
A
645 653anti-parallel
Strand 3
A
682 692anti-parallel
Strand 4
A
706 708anti-parallel
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There are 3 strands in 2A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
718 723first strand
Strand 2
A
729 735anti-parallel
Strand 3
A
774 778anti-parallel
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There are 4 strands in 2B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
763 767first strand
Strand 2
A
745 755anti-parallel
Strand 3
A
784 794anti-parallel
Strand 4
A
805 810anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il