Analysis of interatomic Contacts of Structural Units in PDB entry:
1CG2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1CG2 entry

There are 4 chains in PDB entry 1CG2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 26GLY 414
B
GLN 26GLY 414
C
GLN 26GLY 414
D
GLN 26GLY 414
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 1CG2. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
30 51Right-handed alpha
Helix 2
2
A
60 76Right-handed alpha
Helix 3
3
A
121 124Right-handed alpha
Helix 4
4
A
143 158Right-handed alpha
Helix 5
5
A
175 177Right-handed 310
Helix 6
6
A
183 192Right-handed alpha
Helix 7
7
A
234 236Right-handed 310
Helix 8
8
A
240 254Right-handed alpha
Helix 9
9
A
292 306Right-handed alpha
Helix 10
10
A
330 346Right-handed alpha
Helix 11
11
A
362 369Right-handed 310
Helix 12
12
A
394 412Right-handed 310
Helix 13
13
B
30 51Right-handed alpha
Helix 14
14
B
60 76Right-handed alpha
Helix 15
15
B
121 124Right-handed alpha
Helix 16
16
B
143 158Right-handed alpha
Helix 17
17
B
175 177Right-handed 310
Helix 18
18
B
183 192Right-handed alpha
Helix 19
19
B
234 236Right-handed 310
Helix 20
20
B
240 254Right-handed alpha
Helix 21
21
B
292 307Right-handed alpha
Helix 22
22
B
330 346Right-handed alpha
Helix 23
23
B
363 369Right-handed alpha
Helix 24
24
B
394 412Right-handed 310
Helix 25
25
C
30 51Right-handed alpha
Helix 26
26
C
60 76Right-handed alpha
Helix 27
27
C
121 124Right-handed alpha
Helix 28
28
C
143 158Right-handed alpha
Helix 29
29
C
175 177Right-handed 310
Helix 30
30
C
183 192Right-handed alpha
Helix 31
31
C
234 236Right-handed 310
Helix 32
32
C
240 254Right-handed alpha
Helix 33
33
C
257 259Right-handed 310
Helix 34
34
C
292 306Right-handed alpha
Helix 35
35
C
330 346Right-handed alpha
Helix 36
36
C
362 369Right-handed 310
Helix 37
37
C
394 412Right-handed 310
Helix 38
38
D
30 51Right-handed alpha
Helix 39
39
D
60 76Right-handed alpha
Helix 40
40
D
121 124Right-handed alpha
Helix 41
41
D
143 158Right-handed alpha
Helix 42
42
D
175 177Right-handed 310
Helix 43
43
D
183 192Right-handed alpha
Helix 44
44
D
234 236Right-handed 310
Helix 45
45
D
240 254Right-handed alpha
Helix 46
46
D
257 259Right-handed 310
Helix 47
47
D
292 306Right-handed alpha
Helix 48
48
D
330 346Right-handed alpha
Helix 49
49
D
363 369Right-handed alpha
Helix 50
50
D
394 412Right-handed 310
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There are 14 sheets in PDB entry 1CG2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
80 85first strand
Strand 2
A
93 100anti-parallel
Strand 3
A
166 172anti-parallel
Strand 4
A
107 112parallel
Strand 5
A
195 198parallel
Strand 6
A
372 374parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
128 130first strand
Strand 2
A
133 135anti-parallel
Strand 3
A
391 393anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
208 210first strand
Strand 2
A
352 354parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
315 322first strand
Strand 2
A
215 224anti-parallel
Strand 3
A
280 289anti-parallel
Strand 4
A
261 270anti-parallel
Strand 5
D
261 270anti-parallel
Strand 6
D
280 289anti-parallel
Strand 7
D
215 224anti-parallel
Strand 8
D
315 322anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
80 85first strand
Strand 2
B
93 100anti-parallel
Strand 3
B
166 172anti-parallel
Strand 4
B
107 112parallel
Strand 5
B
195 198parallel
Strand 6
B
372 374parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
128 130first strand
Strand 2
B
133 135anti-parallel
Strand 3
B
391 393anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
208 210first strand
Strand 2
B
352 354parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
315 322first strand
Strand 2
B
215 224anti-parallel
Strand 3
B
280 289anti-parallel
Strand 4
B
261 270anti-parallel
Strand 5
C
261 270anti-parallel
Strand 6
C
280 289anti-parallel
Strand 7
C
215 224anti-parallel
Strand 8
C
315 322anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
80 85first strand
Strand 2
C
93 100anti-parallel
Strand 3
C
166 172anti-parallel
Strand 4
C
107 112parallel
Strand 5
C
195 198parallel
Strand 6
C
372 374parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
128 130first strand
Strand 2
C
133 135anti-parallel
Strand 3
C
391 393anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
208 210first strand
Strand 2
C
352 354parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
80 85first strand
Strand 2
D
93 100anti-parallel
Strand 3
D
166 172anti-parallel
Strand 4
D
107 112parallel
Strand 5
D
195 198parallel
Strand 6
D
372 374parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
128 130first strand
Strand 2
D
133 135anti-parallel
Strand 3
D
391 393anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
208 210first strand
Strand 2
D
352 354parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il